CI01000021_04614553_04621970


Basic Information

Item Value
gene id CI01000021_04614553_04621970
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 4613765 ~ 4622428 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_04614553_04621970.mRNA
CTATAAAAAGCAGATGTCAGCAGGTTCTTCAGGTGGTGAGGATTAAAAAAACAAAACTAGCAAGGATATCTCTATGGCAACTAATGCAGGTATTTATCTCATATTCAAAATTTTTGAATATTTCTATGCATAATATGCCTATTTTGCAATAAATGTAAAATATTGTTTCCATATATAATAAACATCGTTAAATCAATATTTTTTTATTTCTCCACCGCTTTTCATTCAATTATGTAGTTTGTAAAGCTTCATGGGATTGTAGTTCTTTTTAAAAATCCCAATGGAAAAAACAAATGGGCAAAATACTTCTGGATCCAAGGTCGCTGAAAAGGTAGGCAGGCTCTGTTGCACTCTATAGCAAAATAAATGTCTTTACGGTGTCAGCATGGTGACTATTCCTTGCATATCAGCCGGCGGATCATTGGTAGTCATGTTGCTGCTTATTTGCATAAAGGTCGTCAGCTGTCTATGTCACTTGTGTCGACAGAAATGCCAACTCTCGTTGAAAATGAATGATATCTGGTCTCATTGTACAGTAGTTTTGTTATAGAGATAGAAAGCCCTAGAAAAATAAATGTACACATTTGTAACTTTAAATTAAACCTGGAAATCAATAGAAATATTCAATGTGTACAACTGTAAACACCTGCATCTTTAGGCATAGGTGGATCATAGCTGGATCATACCGAAGTATTATAACCTTCCCCCACCATGATATGATCTAGTGGCCTTATATTGGTTTGTTCAGCTGTCTGAACAGATATGCTGCCAATATTGCCTGAGGGAAAATGGCCCTCCAAAACAGGGAATTCCAGAAGAGAAAAACTGATAACAAACCTTCAGGTCCTGCATCCCTGGCCTCTAACATCCCTGGGGAGCCATTGGCCAGGTGCTCTGCCCCTTGGGGCCTGAAATATTTGCTGTCCCCGAGCCCGGGGCCACTGAGTAGAACGTTCTACTCGCTGAGATCGCTCCAAGCGCTGAGGCTGGCCTCTGTCAGCAAATTTCTGTCTGGTCTGATTCACCTGGACACTGTGCTCCAGTGTCTGCTGCGCAGATGGTCCAAAGAGCTGTCCTGGGACTACTGGAAGAGACTGAGACAGGGCCAGCATGAGATTTGCCAAGGTGACCCAAGATCCATGACCAGTGCCCTGGGACCCATCATGGGACAGATGGGACTGGAGATCACATATAACCTCCAGTTCTTACTCATCATAGAACTGGTTGATCCCTGTTGCCAAAGTTCAAATCCTGTCTTGCCTCAAAAGAGGGAAAAGCAGGTTCTACCATCATCAGTGCCTATTCTTGTGGAGGTGTGGTGTATTCAATGGATGATTTGCATATCTATGAACCGTGCAACACCATTCGATGATGATCTCTCACACAGGGCTGAAAGAAGAACAAAGACTGAAGACCGACCAACTGCTATTGCAACAAGTCTGGACGAGAAGTCTGAAGATGACATCTACACATAGAAAGCATGTTTTCATGGACTGTGCCACCTTTGGACTCCATGAGTGTGGCCAACGGTGCCAAGGGGGGATTTGTATGGTTGAAACAGTAAATCAAATGTCTTTGTCCATTTTCACGAATTTGGTACTGATAGAGTATTACAGAAACGATACACTTGACATGCATGATATTATTCTGTGAGTTTGTTACATTTACATTTAGATGAACTTAAAAACGTTTTGCATTTAGCTTCATGGAACCTGCAGAAACCCTTGATTATGTCTGTTTTTAGCGCTGAAGAGACGAGTTGAAGAGTCAAAAGTATTTTCTGTAACACAAATGCTGTCGACTGAGCTTAACAATATTATTTTTGAATATTCTTATAATGTTCTTTGTGACAAACCCCTGTGATCTCTTTATGACTCACTCCATTGGCACTGTTAAATCTTCAGCTGCATTGTTGAATATGTTAAATGTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_04614553_04621970.mRNA True 1933 mRNA 0.41 6 4613765 4622428

Neighbor

gene id symbol gene type direction distance location
CI01000021_04576127_04585164 NA coding upstream 28454 4576127 ~ 4585311 (+)
CI01000021_04436103_04476829 OPRL1 coding upstream 136454 4435827 ~ 4477311 (+)
CI01000021_04259458_04263656 NA coding upstream 349659 4259157 ~ 4264106 (+)
CI01000021_04219242_04237829 NA coding upstream 375758 4219187 ~ 4238007 (+)
CI01000021_04087145_04091630 NA coding upstream 521939 4085974 ~ 4091826 (+)
CI01000021_04755472_04758504 NA coding downstream 133044 4755472 ~ 4758654 (+)
CI01000021_04763908_04787185 MYT1B, MYT1 coding downstream 141480 4763908 ~ 4787967 (+)
CI01000021_04795987_04803001 PCMTD2 coding downstream 173559 4795987 ~ 4803104 (+)
CI01000021_04886787_04893309 PLAGL2 coding downstream 263909 4886337 ~ 4893474 (+)
CI01000021_05050240_05098803 NA coding downstream 426492 5048920 ~ 5102550 (+)
G118374 NA non-coding upstream 15006 4598548 ~ 4598759 (+)
G117644 NA non-coding upstream 142860 4406964 ~ 4470905 (+)
G117641 NA non-coding upstream 212267 4401285 ~ 4401498 (+)
G117638 NA non-coding upstream 219986 4393448 ~ 4393779 (+)
G117608 NA non-coding upstream 316436 4296745 ~ 4297329 (+)
G118405 NA non-coding downstream 11074 4633502 ~ 4633936 (+)
G118409 NA non-coding downstream 17499 4639927 ~ 4640220 (+)
G118416 NA non-coding downstream 38910 4661338 ~ 4661573 (+)
G118450 NA non-coding downstream 93864 4716292 ~ 4716495 (+)
G118459 NA non-coding downstream 108672 4731100 ~ 4731317 (+)
G117493 NA other upstream 578089 4033000 ~ 4035676 (+)
G117484 NA other upstream 656013 3956146 ~ 3957752 (+)
G117202 NA other upstream 1285532 3269144 ~ 3328233 (+)
G117237 NA other upstream 1370401 3237854 ~ 3243364 (+)
G116236 NA other upstream 2316570 2289817 ~ 2297195 (+)
G119701 NA other downstream 2177716 6800144 ~ 6860606 (+)

Expression


Co-expression Network