CI01000021_05355570_05361307


Basic Information

Item Value
gene id CI01000021_05355570_05361307
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 5355501 ~ 5362850 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_05355570_05361307.mRNA
AGTATATTATACACTATAATTGGTATTCAACTCTTGTGTCGGAGCTTGTAGTAATACAATTTAATTTTTAATTTTTTTTAGGCTTTCCGTAGCTGTTATGACACACAATTTTTTTCAGAGCCTCCACTGCTCACATTATTAGTAACAGTGTTTAGTTAATCACAAATAAACATATGAAAACACAGTTTTTCACAATAAACACTGGTCGAAAGATTGTAGACTGTACCGTTTATCATGTTACAGTGTAAACACTCTTATTACTCTCATTATTTTTTATCGCATTATCTTTTTTTTTTATATTATAGAGCATAAAACATCCTCACTTCATTTGACATTTAGATACAATGAAAGGTTGCTGCCTATATATTTCATATTTCAACATGTTTCATTCAGTCTGGCAATAATTTGGGAAAAGCCCAGCTAGTACAATGTGTTTAAGTTTATGTAAAAATAACACATTTGTAAGTAAGAATAAATGACTTACCTTTTAGAAATTATATCCTCTGCTGGATCAAGCCACGTGTCGGATTGCGTTCTTCTTCTGAGGTAAATTCTTCAAAGCTTACTCCGCACAGCGTTTTCTTCCTAAAGCCATGAAAAGTCAACGTGATCTCATGAGAATTCTATATTAATTGTACCTAAAGTGTGGTTCTATCGCTTGTACAATTATTTATGTTTGCACAGACACTGCATTGTATGATATTGATGTATTGAAAGCATCTAACGTACACTATTTACATAGGTACAACTTCACAGATGTACAAATGTGTATGAATCCTTATTTATAAATATTAAAATTATGGCATTAATATTTTGATTATATTGTATTCATTTGTCATAGCAATGGCAGTTTGCAGTTGCATTTATTAAACAGTTTAATCATCTCTTTAATATGAAATATTATGAACATTTTGTTCTGCTCTGTGTGACCTGCTGCAAAACTTTTTTGAAGGATTACATAATCTTAAACAAGACTAAAATGAATGAAACTTAAAATGAATAACACTTCTGTAATCATTTAACTATTTCCTGTCATGTCATATTATTATCAATAATATTTAGTTTGCCATGGGACACAAAAGGTGTTTTCTCAGTATAGTCCTATTGTCACAATTCCCTGTGTCTCTGTGCTCAAAGACTTTTATTTTGATGTTCTTTTGTCTTGATGTTTCTGATTTCAGTTCCTCTGATTTAGTTCCTGTTTCCATTGCCATCTTGTTTGTTTTCATAGAAACCCTTTTTTGTTACCATGATAACTTACACTTCACTTAGTCTATTGTTACCTTCATGTATTTAAACTCTCAGTCATCGTCTGATCACTGTCTTGTGTTAACGTTTCGTGCTGGTGTTTCTCTCTATGTTTCTAAGTGGTTATTAAATGTGAGTTTATCATCCTTCTGCATGCATCATGCATTTTTTGTTGTGGATTATCAAGTCAAGCCAGTGTGTAACAGAACACAAGACCATCAAAAATAAGGTATGGCGTTAATAGCAAAGCCGCACCGAGGAGCAATTATGCCCCATATATCAAAATGAACGCCCAATGGAGTATTTTGTGGAGGAGTTCCTCAAGTATAGCGTTATGGTTTCCTGGGATGACGTCACACTTATGGACCATTTTTGGAGTGGCTTGGACTATGATTTTAGTCGGCTGATGCCAGAGGGTGATTGCAATTGGCCCTTGGCACAGTTCATAGACCAGTGCCAGAATTTCATTTTTGGCTGGGCCTGGGCAAAACACATGCGGATTCACAAGAAGACTTGGCGGTCACCAGATGGACAGACGTTCAACGAGATCAACTACATCTGCATCAGTAAGCGGTGGCGATCGACCCTGCTGGATGTGCGGGTGAGTCGGGAGCAGATGTTGGCTCTGACCATTACCTCCTCCTCGCCGAGTGCCGACGAGTTCACCTACTTAGGCAGTGTCATGGCCAACGACGGAGACGCCGAATGCAATGTCATGTGTCGGATCGGAAACACCTCGTCAGTCTCCCAAAGACTCAAGCCCATCTGGGCAGCCACAACGATCTCCATCAAGACCAAAGTGCGCCTGTTCAACAGCATCGTCATACAAGCGGCAATCTACGCGGCGGAAACGTGGAAGACATCGGCGAGGATTGCGCAAAGGCTTAACGTCTTCTTAATATCAGTATTAAAACTAAATATTAATATTTAAGACCATAAATCACTACAGCTCTGATTAGTGCTGGATGATCTTGCCAAATATGAGACATATTTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_05355570_05361307.mRNA True 2248 mRNA 0.37 2 5355501 5362850

Neighbor

gene id symbol gene type direction distance location
CI01000021_05189721_05190994 NA coding downstream 164416 5189642 ~ 5191085 (-)
CI01000021_05170884_05171489 NA coding downstream 183715 5170833 ~ 5171786 (-)
CI01000021_04989798_04995415 GATA5 coding downstream 359037 4989720 ~ 4996464 (-)
CI01000021_04933373_04941799 NA coding downstream 413702 4932988 ~ 4941799 (-)
CI01000021_04917237_04928702 HCK coding downstream 426799 4916221 ~ 4928702 (-)
CI01000021_05414459_05416813 NA coding upstream 50535 5413385 ~ 5416813 (-)
CI01000021_05488457_05506440 SAMHD1 coding upstream 124817 5487667 ~ 5506440 (-)
CI01000021_05519376_05522107 MTG2 coding upstream 155420 5517230 ~ 5522107 (-)
CI01000021_05533611_05540742 NA coding upstream 169813 5532663 ~ 5541008 (-)
CI01000021_05588398_05594436 NA coding upstream 225494 5588344 ~ 5594436 (-)
G118953 NA non-coding downstream 13433 5341839 ~ 5342068 (-)
G118949 NA non-coding downstream 14912 5340358 ~ 5340589 (-)
G118940 NA non-coding downstream 18048 5337246 ~ 5337453 (-)
G118847 NA non-coding downstream 149048 5204597 ~ 5206453 (-)
G118859 NA non-coding downstream 177684 5177300 ~ 5177817 (-)
G119189 NA non-coding upstream 56643 5419493 ~ 5419723 (-)
G119191 NA non-coding upstream 60695 5423545 ~ 5423744 (-)
G119193 NA non-coding upstream 62737 5425587 ~ 5425973 (-)
G119194 NA non-coding upstream 63260 5426110 ~ 5426355 (-)
G119201 NA non-coding upstream 82349 5445199 ~ 5445631 (-)
G118801 NA other downstream 201210 5153891 ~ 5154291 (-)
G118639 NA other downstream 588129 4750097 ~ 4767372 (-)
CI01000021_04035411_04049515 CCM2L other downstream 1305909 4035189 ~ 4049592 (-)
CI01000021_03902018_03931315 ACSS2 other downstream 1423783 3901897 ~ 3932508 (-)
G117893 NA other downstream 2310714 3044019 ~ 3044787 (-)
G119215 NA other upstream 162005 5524855 ~ 5530926 (-)
G119267 NA other upstream 250592 5613442 ~ 5613989 (-)
G119233 NA other upstream 418224 5781074 ~ 5782246 (-)
G119967 NA other upstream 1440005 6802855 ~ 6807625 (-)

Expression


Co-expression Network