CI01000021_05918146_05919901


Basic Information

Item Value
gene id CI01000021_05918146_05919901
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 5917697 ~ 5921113 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_05918146_05919901.mRNA
ACAAATTAGTGGTTGTCAATTTTTTACTCCTACATGACCCTAGGGGACTATATATTTTGTAAAATAAGGGAAAAAAAGAAGAACACGAATTCCCCAAACCTAACTACCTGGTTAATACATATTTGCAAATTCTTTGTAATTCTCCCTTATCAATGAAGCTCTGTTGTTTTCATGTTTAGTTCTTTGTGAGATTTAACGAAGATTTTCTTTTCTAAGATGGCCTGTTTCTGCTCACATTCCTTGATTTCTGCAACATTAAATTCCACTGATATAGAGACATTCACAATCATTATGTTGTTCTATTCTCTAATTCCAATTCTGCTTATATTCTAATTCTGCAATAATCCCCTGCATATTGAGGATTTGAGGCCAATCTTGAGTGACATTTCTCCAAACTTAGATCCTATGTAGTTTGGCAGTCAACAGAACCACTCCACTCCAACTTATAATCTCATTAGTCTAATGGATTTTGTGTATAAGGCCAGTGATGTGTCGGGTTCAGTGTGCACATTAATTACAACTGATTTTGCCAAGGCTTTTGACGCTGTAGACCATACAGTAGCAGTACTTGATCTCAGAGTAAGCCATGGCTTTGTAGTTACATGACCTGCCGTCGTCAGAGTGAGATATCAAGGATGTTTCTCTGACTGGGAATACCCCACATGTGGAGTTGCACAGGAAACCATACTAGGGCCTATAATCTTCTTAGCACTGATTAACAGTGCTCTTCAGGATGAAACAGACCACTGGAAATATGTGGATGACATGACAATTGCCCAGTAGTGGACTCCACAATCACTCTATACCCTCCAAAAGACATTGAATGGTCTTGACGTTTGGGTTGAGAGGCACAAAATGACACTCAACCTAAAGAAATGCAAGGTTTTACATAGGCGCGGGAAGTGGGGGTGCTAAGGATGCTGTAGCACCTCCTGTTTTTTTCTGCGGGCTACTGTTTAACTGCTGGGAATAATAAAACATTTTTTATATATATATTATTATATACTGTATATTAATACTGGAATATTTGGGATTTGACTATGAAAAGAGACTGTGCAGATTTTATTATGCTTGAATTTTGAGTTATTCAAATCAAATCAAGATCTGTATTATTAACCAGATTTGTCGTTGCCAATTACAGCGCGTAACATTAAGGTTACCTTGAGGGACATAATTTCAGTTAGACACACGAAGTGCAGTGTGAATTTGACCATGTCGCAAAAGAGAATTTTCAAAAAAAGTTTTGTGGATGATTCAACTACCACCAACTCCGTATCCAGCTCCACCACGGGCGGCCCCGTCAACGTTGGTCCTGCTGTCCAGACTGCTAACATCATTAGCCCTTCTTCAGACGTTTTGGGACTTCGCAAGATCATTCAACTCAGATGTTGTGTGCAACATTCTTGGGCTGTGTCCAACACGGTGGTGTTTGAGGACAAAAGCAGTATCAAGGATTTGCCATACCTATGGCCCACTTTTGGGAACACTATGTACACTGCAGCAGGATCCAGAGAGGAGAGAGCTGTGGAGGAGATTTTGACAAAAACAAAAGCCTATGCATCAGCAAACAACCTGAAGTTGCCGCTGGACTCTAACAGGACGAGCAGGATCCCAGCTCGTTTTCGCAGCACAACAGCAGTGGAGGATGTTGTGTCAGAAAATGGTGAATCACTGTGGATATGTGAATATTATGAGGCACTTGATCTAGTGACATCTGAAATCGAGCGCAGGTTTGACCAAGCTGGGATGACTACTGCCGCACAGAGGGAGCAAATTCTCATGGATTCCGCAAAGGGGACAGTATGCACAGAGGCCGACCTGAGTTCCCTTCAGCTTCATGGACAGAGCGTCTCTACATCTGCAACTAAGGATGCTGGGTGACTTTACCAAAAAAGAAACACTCCGCACAGTCCAGGAACTTGGACTTTATATGTCAATCCTTCAACCACAACAAGAGGCCTCTTTAAGGAGGTGGAGAAGCTGCTCCAGTTGTGTTTTTGTCTACTGCTTCCTCTGAAAGATCCTTCTCTGCACTTCGCTGTCTGAAAACTTGGCTCCATAACACTGTCACTGAGAAGAGATTGACTCATTTGGCATTACTACATGTCCACAGAGACATTTTGGATCACTTTAATGTTCAGAACCTCGTGAGGGAGTTTATCAGCATCACTCAGAGCACAAAGCCCTGCAAAATCTTAAAGTAAGATGCTATTTTTTCGCATATATGACACCGTGTGCTTGGTTTTGTTTTGGTGTTTTATTGTAATCAGCAAAACAATTCAGTGTTCTTCAGTGAACCTGCAATAATGCTGAAAAAAGTTAATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_05918146_05919901.mRNA True 2330 mRNA 0.41 4 5917697 5921113

Neighbor

gene id symbol gene type direction distance location
CI01000021_05892651_05906514 SLC6A1B, SLC6A1A, SLC6A1 coding downstream 10176 5891853 ~ 5907521 (-)
CI01000021_05876056_05879110 NA coding downstream 38587 5875568 ~ 5879110 (-)
CI01000021_05830018_05845856 SYN2A coding downstream 71561 5829305 ~ 5846136 (-)
CI01000021_05797550_05804777 CNBPA coding downstream 112920 5796708 ~ 5804777 (-)
CI01000021_05729351_05729635 NA coding downstream 187602 5729284 ~ 5730095 (-)
CI01000021_05928007_05937412 TGM1 coding upstream 5662 5926775 ~ 5937771 (-)
CI01000021_05942137_05950309 RABGGTA coding upstream 20776 5941889 ~ 5950309 (-)
CI01000021_05961867_05972445 STXBP3 coding upstream 40482 5961595 ~ 5972445 (-)
CI01000021_06182218_06243950 UTRN coding upstream 261105 6182218 ~ 6243950 (-)
CI01000021_06258993_06262409 NA coding upstream 337880 6258993 ~ 6262544 (-)
G119332 NA non-coding downstream 34284 5883205 ~ 5883413 (-)
G119229 NA non-coding downstream 132107 5782611 ~ 5785590 (-)
G119263 NA non-coding downstream 321454 5596009 ~ 5596243 (-)
G119262 NA non-coding downstream 321772 5595611 ~ 5595925 (-)
G119253 NA non-coding downstream 371470 5546021 ~ 5546227 (-)
G119359 NA non-coding upstream 79137 6000250 ~ 6000500 (-)
G119787 NA non-coding upstream 174045 6095158 ~ 6095456 (-)
G119791 NA non-coding upstream 176964 6098077 ~ 6098327 (-)
G119792 NA non-coding upstream 178406 6099519 ~ 6099884 (-)
G119794 NA non-coding upstream 184971 6106084 ~ 6106441 (-)
G119233 NA other downstream 135451 5781074 ~ 5782246 (-)
G119267 NA other downstream 303708 5613442 ~ 5613989 (-)
G119215 NA other downstream 386771 5524855 ~ 5530926 (-)
G118801 NA other downstream 763406 5153891 ~ 5154291 (-)
G118639 NA other downstream 1150325 4750097 ~ 4767372 (-)
G119967 NA other upstream 881742 6802855 ~ 6807625 (-)

Expression


Co-expression Network