CI01000021_06773262_06780081


Basic Information

Item Value
gene id CI01000021_06773262_06780081
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 6773262 ~ 6780081 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_06773262_06780081.mRNA
ATGAGTGAGTCTAGTGAAATCAAAGATGATGTCACATCCAGCCATGAGGACAAAGACAGCGGCAGTTGCTCTCCTACTGAACCTCAAATATTCCCTGAATCCCAAAGTTTCCCAGCAGACTGCCTTGGTTCGTCTGCCAACACCCATGTGTCCGTTCAGAGTAACTGGTCAATGGATCCACCAACTAATCTCCATATGGCTGATTCTGTCTTAAAGCAGCCAGCTGAAATGCACAGTCAGTCATCCTCAAAGAAACAAATAGCTGCTATTTTGAGGCAACTTCAATGCAATGTGATCACTTTTGTAAAGAAGGAGCTCAGAAAAATCAACAGCGTTTTGGACCCTGATCTCACAGAGTGTACAGAGAGTCAACCAGAAGGAGAAGAAGATGCTCTTGAAGCCAAAGAAGCAACAGTCAAAATCACATTGCACATACTGAAGTGTATGAAGGAGCAAAGCCTCTTTGACAAGCTACTTCAATTTCATCGAATTGATGCATGTCAGCAAAAGCTTAAATCCAGTTTGAAGAACAGGAGCCAGTGTGTATTTGAAGGTATTGCTAAGCAAGGAAATCCAGCTCTACTCGAGAAGATCTACACAGAGCTCTACATCACAGAGGGAGGGAGTGGAGAGGTCAATAATGAGCATGAGGTGAGGCAGATTGAGACAACATCCTGGAAACCAGAGACACAGGAATCGCAGATCAAATGTAATGACATCTTTAAAGTCTTACCTGGGCAAAACAAACGCATCAGAACTGTGCTGACTAAAGGAGTTGCTGGAATTGGAAAAACAGTCTCTGTACAGAAGTTTGTTCTGGACTGGGCGGAAGGAGAAGCCAATCAGGATGTTCATTTCGTATTTCCGTTGCTTTTTCGGGAGCTGAATTTGATTGGCAAAGAGCAGTACACTTTGGAGCAACTTGTTCATTTATTCTTCAGAGAAATTGAGGAATTTAAAATTTCAAACTTTGAGAAATACAAAGTCATATTCATTTTTGATGGTTTGGATGAGTGTCGATTACCTCTTGATTTTAAGAACAACATAAGGTGCTCTGATGTAACTGTAGCAGCCCCAGTGGATGTGCTTCTGACCAATCTCATCAAGGGGAATCTGCTTCCTTCTGCTCTCCTCTGGATCACCTCTCGACCAGCAGCAACCAGTCAGATCCCTCCTGAGTGTGTCGACCAGGTCACAGAGGTACAAGGGTTCAATGACCCTCAGAAGGCTGAGTATTTCAGGAAAAGAATACCTGATCAGACTCTGGCCAACAAAATCATCACACACATCAAATCATCAAGAAGTCTGTACATCATGTGCCACATCCCAGTGTTCTGCTGGATTTCAGCCACTGTTCTGGAGAGAATGTTGGGTGACAAAGAGAGTTGCCAAATCCCCAAGTCTCTAACTGAAATGTACACACACTTCCTGATTTTCCAGACATTACAGATGAAAGATAAGTACAGGGAACAACATCACTTGGATCCACACTTGAGTAGAGACAACATTCTGTCACTTGGAAAACTGGCCTTCCAGCAACTGAGGAAAGGTTTTGTGATCTTCTATGAAGAAGACCTGATCGAATGCGGCATTGATGTCAAAGATGCATCACTATACTCAGGACTGTGCACCCAGATCTTCAGAGAAGAGTTTGGCTTATACCAAAGGAAAGTCTATTGTTTTGTGCATCTGAGTTTCCAAGAGTATCTTGCAGCTTTGTTTGTTCACCTTCACTGGTTTACAACTCAAAAGCCCAGTAGCGATGAATTCACTATACCATTCCAAGACACAGACTTTGGAAAGCTCTGCATGGATTCGTCTCTGTTTGACCTACACAAGAGTGCTGTAAATCAGGCTTTAGAGTCGAGGAATGGGCACTTTGACCTTTTCCTCCGCTTCCTCCTCGGCCTTTCACAGGAGCGCAGTGAGACCTTGTTTCGACACCTTTCAGTACAAATCGGACATGTCGCACACAGCAGTGAGGACACAGTCAGGTACATAAAGGATAAGCTTGGGATGGGTCTTAGCTCAGAGAGGTCCATCAATCTATTCCACTGCCTCAATGAACTGAATGACCATTCTCTTGTCAAGGAAGTCCAAACCTACCTTCACTTCGGAAGACTTTCAATGGAGGTACTTTCAAATGCTCAGTGGTCAGCTCTGGTCTTTGTGCTGCTCACCAGTGATGAGGGACTGGAGATTTTTGACTTGAGAAAATTCTTCAAATCAGATGATTGTCTTTTCAAGCTTCATCCCGTTATCAAAGTCAGCCGGACTGCCATATTGTCCTCGTGTAAACTGACGAAGGAAAGCTGTCCAGCTTTGGCTTCCGTTCTTGAGTCCAGTCCCAATGTTCTGAGAGAACTGGACCTGAGTTTCAATGAGCTTGAAGACAGAGGGGTGAAAAGTCTCTGCTCTGGGCTGAGGAGTCCACATTGCAAACTAGAGACACTAAAACTGGAGTTTTGTGGACTCAGAAGAGACAGCTGTAAAGCGCTTGTTGCTGCTCTTGAGTCAAACCCATTACATCTTAAGGAGCTGGACCTGAGCTACAATAACATCGGAAATGAGGCCGCAACCTGGATTGTGGGTGTATTGCCTGACTGTGTGCTGGAGACTCTTAGACTTTCAAGCTGTGGGATCACAAAGGAGGCCTGTGCTTTCCTCACATCTGCTCTGAGTTCAAAACCATGCCAACTTAAGAAACTGGACCTGAGTGATAACAGACTTTGGGACTTAGGAGTTGGGTTGTTTCCTGGTTTACTTGCAAACCCAAACTGTAACCTCGAAGAGCTGAGATTAGAGAGATGTAATTTTACATTTAAAAGTTGTGGACTTGGTCTGGAGCACTCTCGTCTCACAGCTCTAGATCTTTCTGACAATGACGTGCAGGATTCTGGGATGAAGCAACTCATGAATTCACTGAAGAATCCATCCTGTAAACTTCAGAAATTAAGGCTGTCGTGTTGCAGACTGACAGATAAGGGTTTCTCATCTCTGGCTTCAGCTCTGAGATCAAACCCCACCAGCCTGAAAGAGCTGGATTTGAGCAAAAATTTCCCTGGATGCTCTGGAATAATGCAGCTTTTTACAGTCCTCGGAGAAAAGAGCTGCGCTCTTGAAAAGATGTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_06773262_06780081.mRNA True 3131 mRNA 0.44 10 6773262 6780081

Neighbor

gene id symbol gene type direction distance location
CI01000021_06746518_06768316 CPEB2 coding upstream 4922 6743219 ~ 6771079 (+)
CI01000021_06427686_06431101 NA coding upstream 341509 6427686 ~ 6431753 (+)
CI01000021_06423446_06426296 NA coding upstream 345654 6423446 ~ 6427608 (+)
CI01000021_06411964_06421511 NA coding upstream 351751 6411964 ~ 6421511 (+)
CI01000021_06408474_06411089 NA coding upstream 362173 6408474 ~ 6411089 (+)
CI01000021_06786996_06789224 C1QTNF7 coding downstream 6780 6786861 ~ 6790962 (+)
CI01000021_06798250_06824148 CC2D2A coding downstream 18169 6798250 ~ 6824486 (+)
CI01000021_06906415_06933563 NA coding downstream 126334 6906415 ~ 6934141 (+)
CI01000021_06938981_06939825 NA coding downstream 158740 6938821 ~ 6939825 (+)
CI01000021_06941580_06949099 TCP1.S, TCP1 coding downstream 161499 6941580 ~ 6949099 (+)
G119693 NA non-coding upstream 36884 6736161 ~ 6736378 (+)
G119692 NA non-coding upstream 39566 6733328 ~ 6733696 (+)
G119690 NA non-coding upstream 42538 6730482 ~ 6730724 (+)
G119689 NA non-coding upstream 43449 6729596 ~ 6729813 (+)
G119724 NA non-coding downstream 99671 6879752 ~ 6880618 (+)
G119730 NA non-coding downstream 169392 6949473 ~ 6951481 (+)
G119731 NA non-coding downstream 172646 6952727 ~ 6952936 (+)
G119747 NA non-coding downstream 195706 6975787 ~ 6976016 (+)
CI01000021_04886787_04893309 PLAGL2 other upstream 1883754 4886337 ~ 4893474 (+)
G117493 NA other upstream 2737586 4033000 ~ 4035676 (+)
G117484 NA other upstream 2815510 3956146 ~ 3957752 (+)
G117202 NA other upstream 3445029 3269144 ~ 3328233 (+)
G117237 NA other upstream 3529898 3237854 ~ 3243364 (+)
G119701 NA other downstream 20063 6800144 ~ 6860606 (+)

Expression


Co-expression Network