G115581


Basic Information

Item Value
gene id G115581
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 572728 ~ 573126 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU131293
TTTTTCCTGTGACTAACAGACTAGGTCGACTTGGTCGACTAACGTTAAGTCTACTATTAGGGGGCAGCCCTACTCCAAAGTGATTTTTTCCTCCCTGAAATGGTGCCATTGTAGTCTTAAGTTTTCTTCTGAAAACGTATGCATCATAATATTCCACTTTTAAATAATTCCCGCCCAATGCATACACAAAATAAAGGGCCGAGGCCTGGTTGAGTTGTGTTAGTAGTGTGTTGAAACTGGTGGTTATGGTAAGGGGCAGGACATTTCCCAAACATGCTCGAAGCGCTTGACCAATCACAACACACTGGTTCAGCCGACCAATCAGAGCACATTGTGCTTTTCAGAAGGAGGGGCTTCATAGAGACAGGAACTAAACAGAGCGTTACTGACAGACTGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131293 True 399 lncRNA 0.44 1 572728 573126

Neighbor

gene id symbol gene type direction distance location
CI01000021_00558429_00561268 SNAI1B coding upstream 10641 557795 ~ 562087 (+)
CI01000021_00440399_00440684 NA coding upstream 131772 440399 ~ 440956 (+)
CI01000021_00349073_00352551 NA coding upstream 219607 347775 ~ 353121 (+)
CI01000021_00336727_00346126 NA coding upstream 226336 336420 ~ 346392 (+)
CI01000021_00013488_00033205 NA coding upstream 537823 13058 ~ 34905 (+)
CI01000021_00591222_00592439 NA coding downstream 17191 590317 ~ 592932 (+)
CI01000021_00680850_00686621 NA coding downstream 107724 680850 ~ 687286 (+)
CI01000021_00699356_00722821 BAZ2A coding downstream 126230 699356 ~ 722977 (+)
CI01000021_00748689_00750893 AQP6, MIPB, MIPA, MIP coding downstream 175015 748141 ~ 751000 (+)
CI01000021_00822848_00831637 NA coding downstream 249722 822848 ~ 831680 (+)
G115569 NA non-coding upstream 26146 546320 ~ 546582 (+)
G115566 NA non-coding upstream 29656 542840 ~ 543072 (+)
G115518 NA non-coding upstream 45069 523871 ~ 527659 (+)
G115528 NA non-coding upstream 93336 478692 ~ 479392 (+)
G115549 NA non-coding upstream 98369 473699 ~ 474359 (+)
G115601 NA non-coding downstream 38863 611989 ~ 612386 (+)
G115653 NA non-coding downstream 183854 756980 ~ 757241 (+)
G115655 NA non-coding downstream 185426 758552 ~ 758762 (+)
G115660 NA non-coding downstream 196357 769483 ~ 786300 (+)
G115673 NA non-coding downstream 213616 786742 ~ 786958 (+)
G115519 NA other upstream 88764 480530 ~ 483964 (+)
CI01000021_01332646_01333910 NA other downstream 759447 1331665 ~ 1333951 (+)
G116236 NA other downstream 1716691 2289817 ~ 2297195 (+)
G117237 NA other downstream 2664728 3237854 ~ 3243364 (+)
G117202 NA other downstream 2696018 3269144 ~ 3328233 (+)
G117484 NA other downstream 3383020 3956146 ~ 3957752 (+)

Expression


Co-expression Network