G115653


Basic Information

Item Value
gene id G115653
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 756980 ~ 757241 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU131376
CTCGTGTACCTCAGGAAAAAATGGAGCCGCCCGCTGATGAGGAGCCTGGCGACGTCCGGGCAGAAACCATTTGTCGAGGCGGCTGCATGCTGGTTCTTCAGGCGCAGACCACTCCAAGCCGAGCTCTTCAACGGCCTTAGAGAGCACGCGAATGAGCTCGGAGTCGATGGAAGCCCTGGCGTCGATCGGCTCAAGAGACGGCAAGGGGGTGGAGTCAAGGTGTGAGTCCGGCCAATCCTCAGCGTCCGAGGCCGCTAGGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131376 True 262 lncRNA 0.62 1 756980 757241

Neighbor

gene id symbol gene type direction distance location
CI01000021_00748689_00750893 AQP6, MIPB, MIPA, MIP coding upstream 5980 748141 ~ 751000 (+)
CI01000021_00699356_00722821 BAZ2A coding upstream 34003 699356 ~ 722977 (+)
CI01000021_00680850_00686621 NA coding upstream 69694 680850 ~ 687286 (+)
CI01000021_00591222_00592439 NA coding upstream 164048 590317 ~ 592932 (+)
CI01000021_00558429_00561268 SNAI1B coding upstream 194893 557795 ~ 562087 (+)
CI01000021_00822848_00831637 NA coding downstream 65607 822848 ~ 831680 (+)
CI01000021_00972210_01064592 SAMD10 coding downstream 213972 971213 ~ 1064715 (+)
CI01000021_01100408_01104630 NA coding downstream 343167 1100408 ~ 1104630 (+)
CI01000021_01129847_01154032 UCKL1B, UCKL1 coding downstream 372606 1129847 ~ 1154308 (+)
CI01000021_01219723_01256723 ZBTB46 coding downstream 462482 1219723 ~ 1257080 (+)
G115601 NA non-coding upstream 144594 611989 ~ 612386 (+)
G115581 NA non-coding upstream 183854 572728 ~ 573126 (+)
G115569 NA non-coding upstream 210398 546320 ~ 546582 (+)
G115566 NA non-coding upstream 213908 542840 ~ 543072 (+)
G115518 NA non-coding upstream 229321 523871 ~ 527659 (+)
G115655 NA non-coding downstream 1311 758552 ~ 758762 (+)
G115660 NA non-coding downstream 12242 769483 ~ 786300 (+)
G115673 NA non-coding downstream 29501 786742 ~ 786958 (+)
G115674 NA non-coding downstream 30029 787270 ~ 788025 (+)
G115699 NA non-coding downstream 90998 848239 ~ 852443 (+)
G115519 NA other upstream 273016 480530 ~ 483964 (+)
CI01000021_01332646_01333910 NA other downstream 575332 1331665 ~ 1333951 (+)
G116236 NA other downstream 1532576 2289817 ~ 2297195 (+)
G117237 NA other downstream 2480613 3237854 ~ 3243364 (+)
G117202 NA other downstream 2511903 3269144 ~ 3328233 (+)
G117484 NA other downstream 3198905 3956146 ~ 3957752 (+)

Expression


Co-expression Network