G116245


Basic Information

Item Value
gene id G116245
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 2297335 ~ 2297567 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU132011
GGGAACACAGTTTAAATGATCTCAACATGATTAGTTAGAAAAAAAAACATCTTAAATTTTATATTTATCATAAGGGTCTGATCAGTTTCATAGTCTGTTAAGACTTTCTGAAGCTGATCATTTCATACTAAACCTCATTCATCAATAAATTATATTCTTATTCTCATTTTGTACAGATACTTTAATACAATGTGCATTTTGGTCATCTGAAAAAAAAAGAAGATAATGGTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132011 True 233 lncRNA 0.27 1 2297335 2297567

Neighbor

gene id symbol gene type direction distance location
CI01000021_02269000_02272309 NA coding upstream 24939 2268689 ~ 2272396 (+)
CI01000021_02230472_02252713 NA coding upstream 44189 2229991 ~ 2253146 (+)
CI01000021_01977248_01980449 NA coding upstream 316829 1976939 ~ 1980506 (+)
CI01000021_01771612_01785627 EXOSC10 coding upstream 511669 1771389 ~ 1785666 (+)
CI01000021_01717640_01718394 NA coding upstream 578456 1717640 ~ 1718879 (+)
CI01000021_02322467_02328819 SNX21 coding downstream 24900 2322467 ~ 2329864 (+)
CI01000021_02331361_02334546 NA coding downstream 33583 2331150 ~ 2334622 (+)
CI01000021_02346223_02369457 NA coding downstream 48438 2346005 ~ 2371089 (+)
CI01000021_02378299_02383589 NA coding downstream 80477 2378044 ~ 2383760 (+)
CI01000021_02402058_02447882 PHACTR3A coding downstream 104112 2401679 ~ 2447882 (+)
G116231 NA non-coding upstream 11692 2285376 ~ 2285643 (+)
G116217 NA non-coding upstream 46050 2250984 ~ 2251285 (+)
G116216 NA non-coding upstream 48805 2248266 ~ 2248530 (+)
G116185 NA non-coding upstream 86632 2210464 ~ 2210703 (+)
G116167 NA non-coding upstream 117783 2179160 ~ 2179552 (+)
G116246 NA non-coding downstream 8833 2306400 ~ 2306639 (+)
G116253 NA non-coding downstream 53954 2351521 ~ 2351780 (+)
G116243 NA non-coding downstream 107690 2405257 ~ 2408394 (+)
G116320 NA non-coding downstream 237521 2535088 ~ 2535564 (+)
G116324 NA non-coding downstream 242547 2540114 ~ 2540328 (+)
G116236 NA other upstream 140 2289817 ~ 2297195 (+)
CI01000021_01332646_01333910 NA other upstream 962926 1331665 ~ 1333951 (+)
G115519 NA other upstream 1813371 480530 ~ 483964 (+)
G117237 NA other downstream 940287 3237854 ~ 3243364 (+)
G117202 NA other downstream 971577 3269144 ~ 3328233 (+)
G117484 NA other downstream 1658579 3956146 ~ 3957752 (+)
G117493 NA other downstream 1735433 4033000 ~ 4035676 (+)
CI01000021_04886787_04893309 PLAGL2 other downstream 2545166 4886337 ~ 4893474 (+)

Expression


Co-expression Network