G116324


Basic Information

Item Value
gene id G116324
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 2540114 ~ 2540328 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU132141
AGCACTGAGCGCCCGGTGATCACCTGGATCCCACAACTTTGAAAACTTCAAAATTTTCAAATAGGCACTATCTTTATCAATAAACCACAAATTTGAACTTTAAACCAGTACATTCTCACCTGAAAAACTCCTAAAACTACATATCATGACATAATAACCGTAGTATGTTTAAATTACGCGGGTTTTCTCCTTTACTATTGGCGCTTGCTGGTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132141 True 215 lncRNA 0.38 1 2540114 2540328

Neighbor

gene id symbol gene type direction distance location
CI01000021_02495559_02501217 FAM217B coding upstream 38387 2495559 ~ 2501727 (+)
CI01000021_02402058_02447882 PHACTR3A coding upstream 92232 2401679 ~ 2447882 (+)
CI01000021_02378299_02383589 NA coding upstream 156354 2378044 ~ 2383760 (+)
CI01000021_02346223_02369457 NA coding upstream 169025 2346005 ~ 2371089 (+)
CI01000021_02331361_02334546 NA coding upstream 205492 2331150 ~ 2334622 (+)
CI01000021_02581650_02610697 NA coding downstream 41322 2581650 ~ 2611607 (+)
CI01000021_02877008_02877864 NA coding downstream 336189 2876517 ~ 2878823 (+)
CI01000021_02930718_02985342 CNTN3A.2 coding downstream 390390 2930718 ~ 2985342 (+)
CI01000021_03044076_03086657 NA coding downstream 503748 3044076 ~ 3086657 (+)
CI01000021_03101146_03115161 RYBPA coding downstream 560625 3100953 ~ 3115468 (+)
G116320 NA non-coding upstream 4550 2535088 ~ 2535564 (+)
G116243 NA non-coding upstream 131720 2405257 ~ 2408394 (+)
G116253 NA non-coding upstream 188334 2351521 ~ 2351780 (+)
G116246 NA non-coding upstream 233475 2306400 ~ 2306639 (+)
G116245 NA non-coding upstream 242547 2297335 ~ 2297567 (+)
G116277 NA non-coding downstream 2877 2543205 ~ 2579519 (+)
G116273 NA non-coding downstream 18412 2558740 ~ 2566648 (+)
G117073 NA non-coding downstream 272155 2812483 ~ 2816693 (+)
G117031 NA non-coding downstream 278133 2818461 ~ 2839917 (+)
G117075 NA non-coding downstream 280261 2820589 ~ 2865155 (+)
G116236 NA other upstream 242919 2289817 ~ 2297195 (+)
CI01000021_01332646_01333910 NA other upstream 1205705 1331665 ~ 1333951 (+)
G115519 NA other upstream 2056150 480530 ~ 483964 (+)
G117237 NA other downstream 697526 3237854 ~ 3243364 (+)
G117202 NA other downstream 728816 3269144 ~ 3328233 (+)
G117484 NA other downstream 1415818 3956146 ~ 3957752 (+)
G117493 NA other downstream 1492672 4033000 ~ 4035676 (+)
CI01000021_04886787_04893309 PLAGL2 other downstream 2302405 4886337 ~ 4893474 (+)

Expression


Co-expression Network