G117075


Basic Information

Item Value
gene id G117075
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 2820589 ~ 2865155 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU133020
CTTAAAGCGATTATCACAAGCTGTTTCTTAAAAAAAGAGCTTGGAGAGGCGCTGTTTGGCTATTTCTGTTATTGCATCACATCTCAAAAGGGCGTCTCGAGACCCTCGCATTCTGCACTGCACTTTTTTTTTTTTTTTAAATGTATATGCTTTATATAAACAAACGTTCGCCTTCTAAGTGCCTCCGCCAAAACCGCATTTCTGTATTCTCCAAAAAGCTTACGCTGTATGTCCTACGCCTTCCCTATTCAACTTACGGAAAACATGTAACTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133020 True 274 lncRNA 0.40 2 2820589 2865155

Neighbor

gene id symbol gene type direction distance location
CI01000021_02581650_02610697 NA coding upstream 208982 2581650 ~ 2611607 (+)
CI01000021_02495559_02501217 FAM217B coding upstream 318862 2495559 ~ 2501727 (+)
CI01000021_02402058_02447882 PHACTR3A coding upstream 372707 2401679 ~ 2447882 (+)
CI01000021_02378299_02383589 NA coding upstream 436829 2378044 ~ 2383760 (+)
CI01000021_02346223_02369457 NA coding upstream 449500 2346005 ~ 2371089 (+)
CI01000021_02877008_02877864 NA coding downstream 11362 2876517 ~ 2878823 (+)
CI01000021_02930718_02985342 CNTN3A.2 coding downstream 65563 2930718 ~ 2985342 (+)
CI01000021_03044076_03086657 NA coding downstream 178921 3044076 ~ 3086657 (+)
CI01000021_03101146_03115161 RYBPA coding downstream 235798 3100953 ~ 3115468 (+)
CI01000021_03119361_03125084 EIF4E3 coding downstream 254206 3119361 ~ 3126781 (+)
G117073 NA non-coding upstream 3896 2812483 ~ 2816693 (+)
G116277 NA non-coding upstream 241070 2543205 ~ 2579519 (+)
G116273 NA non-coding upstream 253941 2558740 ~ 2566648 (+)
G116324 NA non-coding upstream 280261 2540114 ~ 2540328 (+)
G116320 NA non-coding upstream 285025 2535088 ~ 2535564 (+)
G117137 NA non-coding downstream 2656 2867811 ~ 2868128 (+)
G117138 NA non-coding downstream 4800 2869955 ~ 2870327 (+)
G117161 NA non-coding downstream 24084 2889239 ~ 2889861 (+)
G117164 NA non-coding downstream 26952 2892107 ~ 2892529 (+)
G117182 NA non-coding downstream 158877 3024032 ~ 3024233 (+)
G116236 NA other upstream 523394 2289817 ~ 2297195 (+)
CI01000021_01332646_01333910 NA other upstream 1486180 1331665 ~ 1333951 (+)
G115519 NA other upstream 2336625 480530 ~ 483964 (+)
G117237 NA other downstream 372699 3237854 ~ 3243364 (+)
G117202 NA other downstream 403989 3269144 ~ 3328233 (+)
G117484 NA other downstream 1090991 3956146 ~ 3957752 (+)
G117493 NA other downstream 1167845 4033000 ~ 4035676 (+)
CI01000021_04886787_04893309 PLAGL2 other downstream 1977578 4886337 ~ 4893474 (+)

Expression


Co-expression Network