G117182


Basic Information

Item Value
gene id G117182
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 3024032 ~ 3024233 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU133160
CTGGCCCTAAGTCTTAATTTTGAACTATATATTTGTTTCATATTTTGATGCCTAACACTCTTCCATTTGTGAAATGTTTTGATTGAAGAGTGTGTTTGTGTTGTATTTCGTAACAATGCCTCTTGGTTTGTTGCTTAAGTGTCCAAATACTTTTTGGGGCCACTGTATATTGTGAGATATCGCTCAATAAAATACATCGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133160 True 202 lncRNA 0.35 1 3024032 3024233

Neighbor

gene id symbol gene type direction distance location
CI01000021_02930718_02985342 CNTN3A.2 coding upstream 38690 2930718 ~ 2985342 (+)
CI01000021_02877008_02877864 NA coding upstream 145209 2876517 ~ 2878823 (+)
CI01000021_02581650_02610697 NA coding upstream 412425 2581650 ~ 2611607 (+)
CI01000021_02495559_02501217 FAM217B coding upstream 522305 2495559 ~ 2501727 (+)
CI01000021_02402058_02447882 PHACTR3A coding upstream 576150 2401679 ~ 2447882 (+)
CI01000021_03044076_03086657 NA coding downstream 19843 3044076 ~ 3086657 (+)
CI01000021_03101146_03115161 RYBPA coding downstream 76720 3100953 ~ 3115468 (+)
CI01000021_03119361_03125084 EIF4E3 coding downstream 95128 3119361 ~ 3126781 (+)
CI01000021_03164405_03179692 FOXP1A coding downstream 140172 3164405 ~ 3179949 (+)
CI01000021_03349081_03350266 NA coding downstream 324848 3349081 ~ 3351180 (+)
G117164 NA non-coding upstream 131503 2892107 ~ 2892529 (+)
G117161 NA non-coding upstream 134171 2889239 ~ 2889861 (+)
G117138 NA non-coding upstream 153705 2869955 ~ 2870327 (+)
G117137 NA non-coding upstream 155904 2867811 ~ 2868128 (+)
G117075 NA non-coding upstream 158877 2820589 ~ 2865155 (+)
G117239 NA non-coding downstream 215102 3239335 ~ 3299281 (+)
G117202 NA non-coding downstream 244911 3269144 ~ 3328233 (+)
G117260 NA non-coding downstream 269033 3293266 ~ 3293887 (+)
G117211 NA non-coding downstream 296364 3320597 ~ 3323372 (+)
G117303 NA non-coding downstream 344081 3368314 ~ 3368525 (+)
G116236 NA other upstream 726837 2289817 ~ 2297195 (+)
CI01000021_01332646_01333910 NA other upstream 1689623 1331665 ~ 1333951 (+)
G115519 NA other upstream 2540068 480530 ~ 483964 (+)
G117237 NA other downstream 213621 3237854 ~ 3243364 (+)
G117484 NA other downstream 931913 3956146 ~ 3957752 (+)
G117493 NA other downstream 1008767 4033000 ~ 4035676 (+)
CI01000021_04886787_04893309 PLAGL2 other downstream 1818500 4886337 ~ 4893474 (+)

Expression


Co-expression Network