Gene
RNA
| Item | Value |
|---|---|
| gene id | G117884 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000021 |
| NCBI id | null |
| chromosome length | 7014339 |
| location | 3025780 ~ 3026250 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU133953 | True | 471 | lncRNA | 0.42 | 1 | 3025780 | 3026250 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000021_02791299_02829637 | CHL1A | coding | downstream | 195901 | 2790485 ~ 2829879 (-) |
| CI01000021_02620174_02687913 | CNTN3A.1 | coding | downstream | 337867 | 2619568 ~ 2687913 (-) |
| CI01000021_02522404_02530893 | NA | coding | downstream | 494887 | 2522053 ~ 2530893 (-) |
| CI01000021_02503590_02509554 | TTLL9 | coding | downstream | 516226 | 2502568 ~ 2509554 (-) |
| CI01000021_02492524_02493429 | PPP1R3DA | coding | downstream | 532351 | 2492137 ~ 2493429 (-) |
| CI01000021_03088285_03098959 | NA | coding | upstream | 61775 | 3088025 ~ 3098959 (-) |
| CI01000021_03184886_03225117 | TNS2, TNS2A | coding | upstream | 158316 | 3184566 ~ 3231042 (-) |
| CI01000021_03246184_03250332 | NA | coding | upstream | 219761 | 3246011 ~ 3250332 (-) |
| CI01000021_03267771_03288743 | EIF4BA, EIF4B | coding | upstream | 241052 | 3267302 ~ 3288743 (-) |
| CI01000021_03319954_03323293 | NA | coding | upstream | 292860 | 3319110 ~ 3323340 (-) |
| G117882 | NA | non-coding | downstream | 5496 | 3020069 ~ 3020284 (-) |
| G117881 | NA | non-coding | downstream | 12689 | 3012638 ~ 3013091 (-) |
| G117683 | NA | non-coding | downstream | 133421 | 2891860 ~ 2892359 (-) |
| G117139 | NA | non-coding | downstream | 155507 | 2869945 ~ 2870273 (-) |
| G117136 | NA | non-coding | downstream | 158348 | 2867203 ~ 2867432 (-) |
| G117894 | NA | non-coding | upstream | 19948 | 3046198 ~ 3046429 (-) |
| G117896 | NA | non-coding | upstream | 25248 | 3051498 ~ 3051844 (-) |
| G117899 | NA | non-coding | upstream | 29028 | 3055278 ~ 3055643 (-) |
| G117901 | NA | non-coding | upstream | 32407 | 3058657 ~ 3058885 (-) |
| G117902 | NA | non-coding | upstream | 36566 | 3062816 ~ 3063059 (-) |
| G116997 | NA | other | downstream | 312533 | 2712785 ~ 2713247 (-) |
| G116893 | NA | other | downstream | 691464 | 2331314 ~ 2334316 (-) |
| G116856 | NA | other | downstream | 815284 | 2209921 ~ 2210496 (-) |
| G116730 | NA | other | downstream | 1662976 | 1361878 ~ 1362804 (-) |
| G117893 | NA | other | upstream | 17769 | 3044019 ~ 3044787 (-) |
| CI01000021_03902018_03931315 | ACSS2 | other | upstream | 811172 | 3901897 ~ 3932508 (-) |
| CI01000021_04035411_04049515 | CCM2L | other | upstream | 1019034 | 4035189 ~ 4049592 (-) |
| G118639 | NA | other | upstream | 1723847 | 4750097 ~ 4767372 (-) |
| G118801 | NA | other | upstream | 2127641 | 5153891 ~ 5154291 (-) |
