Gene
RNA
| Item | Value |
|---|---|
| gene id | G117915 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000021 |
| NCBI id | null |
| chromosome length | 7014339 |
| location | 3080216 ~ 3080497 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU133987 | True | 282 | lncRNA | 0.29 | 1 | 3080216 | 3080497 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000021_02791299_02829637 | CHL1A | coding | downstream | 250337 | 2790485 ~ 2829879 (-) |
| CI01000021_02620174_02687913 | CNTN3A.1 | coding | downstream | 392303 | 2619568 ~ 2687913 (-) |
| CI01000021_02522404_02530893 | NA | coding | downstream | 549323 | 2522053 ~ 2530893 (-) |
| CI01000021_02503590_02509554 | TTLL9 | coding | downstream | 570662 | 2502568 ~ 2509554 (-) |
| CI01000021_02492524_02493429 | PPP1R3DA | coding | downstream | 586787 | 2492137 ~ 2493429 (-) |
| CI01000021_03088285_03098959 | NA | coding | upstream | 7528 | 3088025 ~ 3098959 (-) |
| CI01000021_03184886_03225117 | TNS2, TNS2A | coding | upstream | 104069 | 3184566 ~ 3231042 (-) |
| CI01000021_03246184_03250332 | NA | coding | upstream | 165514 | 3246011 ~ 3250332 (-) |
| CI01000021_03267771_03288743 | EIF4BA, EIF4B | coding | upstream | 186805 | 3267302 ~ 3288743 (-) |
| CI01000021_03319954_03323293 | NA | coding | upstream | 238613 | 3319110 ~ 3323340 (-) |
| G117912 | NA | non-coding | downstream | 3817 | 3076173 ~ 3076399 (-) |
| G117910 | NA | non-coding | downstream | 6951 | 3073054 ~ 3073265 (-) |
| G117909 | NA | non-coding | downstream | 8650 | 3071081 ~ 3071566 (-) |
| G117908 | NA | non-coding | downstream | 9999 | 3069767 ~ 3070217 (-) |
| G117907 | NA | non-coding | downstream | 12242 | 3067731 ~ 3067974 (-) |
| G117777 | NA | non-coding | upstream | 28845 | 3109342 ~ 3109859 (-) |
| G117749 | NA | non-coding | upstream | 29424 | 3109921 ~ 3118508 (-) |
| G117789 | NA | non-coding | upstream | 47672 | 3128169 ~ 3135828 (-) |
| G117957 | NA | non-coding | upstream | 256772 | 3337269 ~ 3337605 (-) |
| G117893 | NA | other | downstream | 35429 | 3044019 ~ 3044787 (-) |
| G117683 | NA | other | downstream | 187881 | 2891860 ~ 2892359 (-) |
| G116997 | NA | other | downstream | 366969 | 2712785 ~ 2713247 (-) |
| G116893 | NA | other | downstream | 745900 | 2331314 ~ 2334316 (-) |
| G116856 | NA | other | downstream | 869720 | 2209921 ~ 2210496 (-) |
| CI01000021_03902018_03931315 | ACSS2 | other | upstream | 756925 | 3901897 ~ 3932508 (-) |
| CI01000021_04035411_04049515 | CCM2L | other | upstream | 964787 | 4035189 ~ 4049592 (-) |
| G118639 | NA | other | upstream | 1669600 | 4750097 ~ 4767372 (-) |
| G118801 | NA | other | upstream | 2073394 | 5153891 ~ 5154291 (-) |
| G119215 | NA | other | upstream | 2444358 | 5524855 ~ 5530926 (-) |
