G117306


Basic Information

Item Value
gene id G117306
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 3375046 ~ 3375311 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU133300
TCACACTGAGGACAATTGAGGGACTCAAACACAACTATTAAAAAAGGTTCAAACATTCACTGATGCTCCAGAAGGAAGCACGATGCATTAAGAGTCGGGGGGTGAAAACTTTTGAACAGGATGAAGATGTCCAAATTTTTCTTATTTTGTTTAAATATCAATTTTCTTCATTTAGTACTGCCCTTTGGAAGCAACAGAAGATACCTACATGTTTCCCGGAGACAAATTAAGTACAATTTACCTTGATCTTCAAATTCAAAAAGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133300 True 266 lncRNA 0.35 1 3375046 3375311

Neighbor

gene id symbol gene type direction distance location
CI01000021_03349081_03350266 NA coding upstream 23866 3349081 ~ 3351180 (+)
CI01000021_03164405_03179692 FOXP1A coding upstream 195097 3164405 ~ 3179949 (+)
CI01000021_03119361_03125084 EIF4E3 coding upstream 248265 3119361 ~ 3126781 (+)
CI01000021_03101146_03115161 RYBPA coding upstream 259578 3100953 ~ 3115468 (+)
CI01000021_03044076_03086657 NA coding upstream 288389 3044076 ~ 3086657 (+)
CI01000021_03382666_03386768 S1, KRT8, E3, KRT4 coding downstream 5458 3380769 ~ 3386900 (+)
CI01000021_03428718_03432817 NA coding downstream 53265 3428576 ~ 3433102 (+)
CI01000021_03510302_03551418 PLXNB1A coding downstream 134937 3510248 ~ 3551572 (+)
CI01000021_03562381_03570309 NA coding downstream 186976 3562287 ~ 3571272 (+)
CI01000021_03594629_03615777 PRKCBP1L coding downstream 219318 3594629 ~ 3616329 (+)
G117303 NA non-coding upstream 6521 3368314 ~ 3368525 (+)
G117202 NA non-coding upstream 50176 3269144 ~ 3328233 (+)
G117211 NA non-coding upstream 51674 3320597 ~ 3323372 (+)
G117239 NA non-coding upstream 75765 3239335 ~ 3299281 (+)
G117260 NA non-coding upstream 81159 3293266 ~ 3293887 (+)
G117308 NA non-coding downstream 1411 3376722 ~ 3376972 (+)
G117346 NA non-coding downstream 36587 3411898 ~ 3417615 (+)
G117327 NA non-coding downstream 75904 3451215 ~ 3478399 (+)
G117365 NA non-coding downstream 137401 3512712 ~ 3513001 (+)
G117366 NA non-coding downstream 161058 3536369 ~ 3537382 (+)
G117237 NA other upstream 131682 3237854 ~ 3243364 (+)
G116236 NA other upstream 1077851 2289817 ~ 2297195 (+)
CI01000021_01332646_01333910 NA other upstream 2040637 1331665 ~ 1333951 (+)
G115519 NA other upstream 2891082 480530 ~ 483964 (+)
G117484 NA other downstream 580835 3956146 ~ 3957752 (+)
G117493 NA other downstream 657689 4033000 ~ 4035676 (+)
CI01000021_04886787_04893309 PLAGL2 other downstream 1467422 4886337 ~ 4893474 (+)
G119701 NA other downstream 3424833 6800144 ~ 6860606 (+)

Expression


Co-expression Network