Gene
RNA
| Item | Value |
|---|---|
| gene id | G117431 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000021 |
| NCBI id | null |
| chromosome length | 7014339 |
| location | 3914686 ~ 3926601 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU133443 | True | 1004 | lncRNA | 0.39 | 2 | 3914686 | 3926601 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000021_03793387_03846383 | NA | coding | upstream | 68303 | 3793387 ~ 3846383 (+) |
| CI01000021_03640760_03747887 | LAMA5 | coding | upstream | 166799 | 3640760 ~ 3747887 (+) |
| CI01000021_03617827_03624592 | MAPRE1B, MAPRE1 | coding | upstream | 289782 | 3617827 ~ 3624904 (+) |
| CI01000021_03594629_03615777 | PRKCBP1L | coding | upstream | 298357 | 3594629 ~ 3616329 (+) |
| CI01000021_03562381_03570309 | NA | coding | upstream | 343414 | 3562287 ~ 3571272 (+) |
| CI01000021_04087145_04091630 | NA | coding | downstream | 159373 | 4085974 ~ 4091826 (+) |
| CI01000021_04219242_04237829 | NA | coding | downstream | 292586 | 4219187 ~ 4238007 (+) |
| CI01000021_04259458_04263656 | NA | coding | downstream | 332556 | 4259157 ~ 4264106 (+) |
| CI01000021_04436103_04476829 | OPRL1 | coding | downstream | 509226 | 4435827 ~ 4477311 (+) |
| CI01000021_04576127_04585164 | NA | coding | downstream | 649526 | 4576127 ~ 4585311 (+) |
| G117329 | NA | non-coding | upstream | 228417 | 3684236 ~ 3686269 (+) |
| G117366 | NA | non-coding | upstream | 377304 | 3536369 ~ 3537382 (+) |
| G117365 | NA | non-coding | upstream | 401685 | 3512712 ~ 3513001 (+) |
| G117327 | NA | non-coding | upstream | 436287 | 3451215 ~ 3478399 (+) |
| G117346 | NA | non-coding | upstream | 497071 | 3411898 ~ 3417615 (+) |
| G117471 | NA | non-coding | downstream | 1238 | 3927839 ~ 3931690 (+) |
| G117490 | NA | non-coding | downstream | 65055 | 3991656 ~ 4102768 (+) |
| G117492 | NA | non-coding | downstream | 72422 | 3999023 ~ 4001123 (+) |
| G117556 | NA | non-coding | downstream | 217900 | 4144501 ~ 4144835 (+) |
| G117564 | NA | non-coding | downstream | 236734 | 4163335 ~ 4163560 (+) |
| G117202 | NA | other | upstream | 586453 | 3269144 ~ 3328233 (+) |
| G117237 | NA | other | upstream | 671322 | 3237854 ~ 3243364 (+) |
| G116236 | NA | other | upstream | 1617491 | 2289817 ~ 2297195 (+) |
| CI01000021_01332646_01333910 | NA | other | upstream | 2580277 | 1331665 ~ 1333951 (+) |
| G115519 | NA | other | upstream | 3430722 | 480530 ~ 483964 (+) |
| G117484 | NA | other | downstream | 29545 | 3956146 ~ 3957752 (+) |
| G117493 | NA | other | downstream | 106399 | 4033000 ~ 4035676 (+) |
| CI01000021_04886787_04893309 | PLAGL2 | other | downstream | 916132 | 4886337 ~ 4893474 (+) |
| G119701 | NA | other | downstream | 2873543 | 6800144 ~ 6860606 (+) |
