G117644


Basic Information

Item Value
gene id G117644
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 4406964 ~ 4470905 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU133684
TGTGTGTGTGTGTGTGTGTGTGCGTGTGTATGTGTGTGCACATTTTTGTGATTTATGAGGACACAAATTTGTATAATAACATGCGTATTACACTGGTATTACAATGTAAACATGAAATATGAGGACATTTCATGAGTCCTCAAATTTAAAATAGCTTTAAAACTAAACAATAATACTAAACAATGTTTTATTAAAAATGTAAAAATGCAGAATGTTTTCTGTGATGGGTAGGTTTAGGAGTAGGGGTAGTGTAGGGGGATAGAATGCACAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133684 True 272 lncRNA 0.33 2 4406964 4470905

Neighbor

gene id symbol gene type direction distance location
CI01000021_04259458_04263656 NA coding upstream 142858 4259157 ~ 4264106 (+)
CI01000021_04219242_04237829 NA coding upstream 168957 4219187 ~ 4238007 (+)
CI01000021_04087145_04091630 NA coding upstream 315138 4085974 ~ 4091826 (+)
CI01000021_03793387_03846383 NA coding upstream 560581 3793387 ~ 3846383 (+)
CI01000021_03640760_03747887 LAMA5 coding upstream 659077 3640760 ~ 3747887 (+)
CI01000021_04576127_04585164 NA coding downstream 105222 4576127 ~ 4585311 (+)
CI01000021_04614553_04621970 NA coding downstream 142860 4613765 ~ 4622428 (+)
CI01000021_04755472_04758504 NA coding downstream 284567 4755472 ~ 4758654 (+)
CI01000021_04763908_04787185 MYT1B, MYT1 coding downstream 293003 4763908 ~ 4787967 (+)
CI01000021_04795987_04803001 PCMTD2 coding downstream 325082 4795987 ~ 4803104 (+)
G117641 NA non-coding upstream 5466 4401285 ~ 4401498 (+)
G117638 NA non-coding upstream 13185 4393448 ~ 4393779 (+)
G117608 NA non-coding upstream 109635 4296745 ~ 4297329 (+)
G117435 NA non-coding upstream 162886 4242624 ~ 4244078 (+)
G117587 NA non-coding upstream 167125 4239627 ~ 4239839 (+)
G118374 NA non-coding downstream 127643 4598548 ~ 4598759 (+)
G118405 NA non-coding downstream 162597 4633502 ~ 4633936 (+)
G118409 NA non-coding downstream 169022 4639927 ~ 4640220 (+)
G118416 NA non-coding downstream 190433 4661338 ~ 4661573 (+)
G118450 NA non-coding downstream 245387 4716292 ~ 4716495 (+)
G117493 NA other upstream 371288 4033000 ~ 4035676 (+)
G117484 NA other upstream 449212 3956146 ~ 3957752 (+)
G117202 NA other upstream 1078731 3269144 ~ 3328233 (+)
G117237 NA other upstream 1163600 3237854 ~ 3243364 (+)
G116236 NA other upstream 2109769 2289817 ~ 2297195 (+)
CI01000021_04886787_04893309 PLAGL2 other downstream 371828 4886337 ~ 4893474 (+)
G119701 NA other downstream 2329239 6800144 ~ 6860606 (+)

Expression


Co-expression Network