G118405


Basic Information

Item Value
gene id G118405
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 4633502 ~ 4633936 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU134514
GGGAAGCCTTGCTGTGACAGGGTTGTCATCAGAGTGGCCTTGAAAAGGGCACGGGGAGTGACTCACTTTGAAAAATAACCCTTCTTTTTTTCTTCTTCTTTTTTCTTTTTCTTGTTTTTTTTTTTTTTTTGCTGTAATAACCCAAACAACATCACGCCTGGATTCAAAGAGCATCATGTTTATGTTAGGACAGAGAAAAGGCGATTGAGGATAGATCCGGCTCTCCCGGGTCTTGTACACCTAACCTCCTCTACCTCTTTTTTATGACAAGTATGCTAGATAATACAAATTGCTTCATTACTTAGTTAACAGGCCTGAATACTTTCTAGCCATTAACAATAACAGCCTTCACATTTACATAGACCCAGAATTCAACCACCCACCAGTGCAGAAGGATTTTTAATTTGTTCAGAAATGAAGAGATCAGGCATTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134514 True 435 lncRNA 0.39 1 4633502 4633936

Neighbor

gene id symbol gene type direction distance location
CI01000021_04614553_04621970 NA coding upstream 11074 4613765 ~ 4622428 (+)
CI01000021_04576127_04585164 NA coding upstream 48191 4576127 ~ 4585311 (+)
CI01000021_04436103_04476829 OPRL1 coding upstream 156191 4435827 ~ 4477311 (+)
CI01000021_04259458_04263656 NA coding upstream 369396 4259157 ~ 4264106 (+)
CI01000021_04219242_04237829 NA coding upstream 395495 4219187 ~ 4238007 (+)
CI01000021_04755472_04758504 NA coding downstream 121536 4755472 ~ 4758654 (+)
CI01000021_04763908_04787185 MYT1B, MYT1 coding downstream 129972 4763908 ~ 4787967 (+)
CI01000021_04795987_04803001 PCMTD2 coding downstream 162051 4795987 ~ 4803104 (+)
CI01000021_04886787_04893309 PLAGL2 coding downstream 252401 4886337 ~ 4893474 (+)
CI01000021_05050240_05098803 NA coding downstream 414984 5048920 ~ 5102550 (+)
G118374 NA non-coding upstream 34743 4598548 ~ 4598759 (+)
G117644 NA non-coding upstream 162597 4406964 ~ 4470905 (+)
G117641 NA non-coding upstream 232004 4401285 ~ 4401498 (+)
G117638 NA non-coding upstream 239723 4393448 ~ 4393779 (+)
G117608 NA non-coding upstream 336173 4296745 ~ 4297329 (+)
G118409 NA non-coding downstream 5991 4639927 ~ 4640220 (+)
G118416 NA non-coding downstream 27402 4661338 ~ 4661573 (+)
G118450 NA non-coding downstream 82356 4716292 ~ 4716495 (+)
G118459 NA non-coding downstream 97164 4731100 ~ 4731317 (+)
G118438 NA non-coding downstream 219219 4853155 ~ 4882086 (+)
G117493 NA other upstream 597826 4033000 ~ 4035676 (+)
G117484 NA other upstream 675750 3956146 ~ 3957752 (+)
G117202 NA other upstream 1305269 3269144 ~ 3328233 (+)
G117237 NA other upstream 1390138 3237854 ~ 3243364 (+)
G116236 NA other upstream 2336307 2289817 ~ 2297195 (+)
G119701 NA other downstream 2166208 6800144 ~ 6860606 (+)

Expression


Co-expression Network