G119578


Basic Information

Item Value
gene id G119578
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 6480076 ~ 6480409 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU135779
GGCTGCTCTCTTGAGGGCCCATGTGTGCTCGTTGTACCACGGTGTTTGACTAATGTCCTTAATCTTCTTTGAGCACAAAGGACCAACTGAGTCTAGTGTGCTGCAAAAGAGAGAGTCAATAGTTTCTGTTGTAACATCGAGTTCTTCTAAGCTATCTGGTATGCTAAGAAGATGAAACTGATCAGGAAGATTATTTATAAAGCAATCTTTAGTGGTAGAAGTGATAGTTCTACCATATTTGTGGCAGAGAGGCGGTTTTGCAGCTTTGGCTAAATATAGTATACACAAGACTAGATAATGATCTGAGATGTCGTCACTCTGCTGCAGAATTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135779 True 334 lncRNA 0.41 1 6480076 6480409

Neighbor

gene id symbol gene type direction distance location
CI01000021_06427686_06431101 NA coding upstream 48323 6427686 ~ 6431753 (+)
CI01000021_06423446_06426296 NA coding upstream 52468 6423446 ~ 6427608 (+)
CI01000021_06411964_06421511 NA coding upstream 58565 6411964 ~ 6421511 (+)
CI01000021_06408474_06411089 NA coding upstream 68987 6408474 ~ 6411089 (+)
CI01000021_06266751_06267607 NA coding upstream 211918 6264966 ~ 6268158 (+)
CI01000021_06746518_06768316 CPEB2 coding downstream 266109 6743219 ~ 6771079 (+)
CI01000021_06773262_06780081 NA coding downstream 292853 6773262 ~ 6780081 (+)
CI01000021_06786996_06789224 C1QTNF7 coding downstream 306452 6786861 ~ 6790962 (+)
CI01000021_06798250_06824148 CC2D2A coding downstream 317841 6798250 ~ 6824486 (+)
CI01000021_06906415_06933563 NA coding downstream 426006 6906415 ~ 6934141 (+)
G119577 NA non-coding upstream 3077 6476776 ~ 6476999 (+)
G119573 NA non-coding upstream 21385 6458406 ~ 6458691 (+)
G119570 NA non-coding upstream 24056 6455768 ~ 6456020 (+)
G119567 NA non-coding upstream 25811 6454041 ~ 6454265 (+)
G119534 NA non-coding upstream 38197 6438967 ~ 6441879 (+)
G119613 NA non-coding downstream 71812 6552221 ~ 6555282 (+)
G119661 NA non-coding downstream 197290 6677699 ~ 6677942 (+)
G119646 NA non-coding downstream 198852 6679261 ~ 6700065 (+)
G119689 NA non-coding downstream 249187 6729596 ~ 6729813 (+)
G119690 NA non-coding downstream 250073 6730482 ~ 6730724 (+)
CI01000021_04886787_04893309 PLAGL2 other upstream 1590568 4886337 ~ 4893474 (+)
G117493 NA other upstream 2444400 4033000 ~ 4035676 (+)
G117484 NA other upstream 2522324 3956146 ~ 3957752 (+)
G117202 NA other upstream 3151843 3269144 ~ 3328233 (+)
G117237 NA other upstream 3236712 3237854 ~ 3243364 (+)
G119701 NA other downstream 319735 6800144 ~ 6860606 (+)

Expression


Co-expression Network