XLOC_008292 (BX088654.1)


Basic Information

Item Value
gene id XLOC_008292
gene name BX088654.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 5855111 ~ 5855225 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016665
TCTGGCAACTAGCTTTTCCCacctctcacatggttgcccactgaagctaagcaaggctgtgCCTGGTTGGCACCTGGTTGGGAGATCACATGAGAAAGATAGGTTGCTGCCAGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113872

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016665 True 115 rRNA 0.52 1 5855111 5855225

Neighbor

gene id symbol gene type direction distance location
XLOC_008291 NA coding upstream 1769 5841557 ~ 5853342 (+)
XLOC_008290 mrap coding upstream 224659 5628363 ~ 5630452 (+)
XLOC_008289 NA coding upstream 383603 5468098 ~ 5471508 (+)
XLOC_008288 or112-1 coding upstream 490603 5360407 ~ 5364508 (+)
XLOC_008287 CABZ01018874.1 coding upstream 510607 5343186 ~ 5344504 (+)
XLOC_008293 get1 coding downstream 46745 5901970 ~ 5916820 (+)
XLOC_008294 sh3bgr coding downstream 68626 5923851 ~ 5958803 (+)
XLOC_008295 igsf5b coding downstream 118684 5973909 ~ 6017920 (+)
XLOC_008296 PCP4 coding downstream 254636 6109861 ~ 6118668 (+)
XLOC_008297 NA coding downstream 303784 6159009 ~ 6160503 (+)
XLOC_008463 BX663520.1 misc downstream 15396966 21252191 ~ 21252282 (+)
XLOC_008278 NA non-coding upstream 598329 5256501 ~ 5256782 (+)
XLOC_008271 NA non-coding upstream 1300683 4553896 ~ 4554428 (+)
XLOC_008270 NA non-coding upstream 1323146 4528549 ~ 4531965 (+)
XLOC_008299 CU655863.1 non-coding downstream 703825 6559050 ~ 6559185 (+)
XLOC_008301 CU633984.1 non-coding downstream 823296 6678521 ~ 6727082 (+)
XLOC_008302 CU694757.1 non-coding downstream 915361 6770586 ~ 6772120 (+)
XLOC_008304 NA non-coding downstream 930424 6785649 ~ 6786055 (+)

Expression


Co-expression Network