Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000024_03945597_03947286 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000024 |
| NCBI id | null |
| chromosome length | 8644187 |
| location | 3945535 ~ 3947286 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| E3 ubiquitin-protein ligase HRD1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000024_03945597_03947286.mRNA | True | 602 | mRNA | 0.49 | 3 | 3945535 | 3947286 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000024_03938368_03941795 | NA | coding | downstream | 3740 | 3938315 ~ 3941924 (-) |
| CI01000024_03919201_03934276 | TBX19 | coding | downstream | 11030 | 3919187 ~ 3934505 (-) |
| CI01000024_03792493_03872952 | KALRNB, KALRN | coding | downstream | 72583 | 3792463 ~ 3872952 (-) |
| CI01000024_03682769_03686417 | SUMO1, SUMO1.L, SUMO-1 | coding | downstream | 259118 | 3681848 ~ 3686417 (-) |
| CI01000024_03593801_03622283 | ALS2, ALS2B | coding | downstream | 323252 | 3593469 ~ 3622283 (-) |
| CI01000024_03950623_03954365 | NA | coding | upstream | 2624 | 3949910 ~ 3954392 (-) |
| CI01000024_03957940_03962240 | RGN | coding | upstream | 10218 | 3957504 ~ 3962240 (-) |
| CI01000024_03964560_03976364 | VPS16 | coding | upstream | 16968 | 3964254 ~ 3976364 (-) |
| CI01000024_04128028_04128273 | NA | coding | upstream | 179783 | 4127069 ~ 4128528 (-) |
| CI01000024_04244945_04245709 | NA | coding | upstream | 297002 | 4244288 ~ 4245767 (-) |
| G123723 | NA | non-coding | downstream | 10596 | 3934726 ~ 3934939 (-) |
| G123698 | NA | non-coding | downstream | 53166 | 3892163 ~ 3892369 (-) |
| G123697 | NA | non-coding | downstream | 53893 | 3891412 ~ 3891642 (-) |
| G123668 | NA | non-coding | downstream | 181438 | 3763444 ~ 3764097 (-) |
| G123577 | NA | non-coding | downstream | 191320 | 3753019 ~ 3754215 (-) |
| G123728 | NA | non-coding | upstream | 28662 | 3975948 ~ 3976198 (-) |
| G123730 | NA | non-coding | upstream | 40108 | 3987394 ~ 3987608 (-) |
| G123806 | NA | non-coding | upstream | 72129 | 4019415 ~ 4019795 (-) |
| G123812 | NA | non-coding | upstream | 76500 | 4023786 ~ 4024060 (-) |
| G123822 | NA | non-coding | upstream | 95605 | 4042891 ~ 4043149 (-) |
| G123233 | NA | other | downstream | 1390499 | 2547460 ~ 2555036 (-) |
| CI01000024_00825386_00837898 | NA | other | downstream | 3118684 | 824968 ~ 838550 (-) |
| G125457 | NA | other | upstream | 3409951 | 7357237 ~ 7358104 (-) |
| G125798 | NA | other | upstream | 4028381 | 7975667 ~ 7976047 (-) |
