CI01000024_04244945_04245709


Basic Information

Item Value
gene id CI01000024_04244945_04245709
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 4244288 ~ 4245767 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_04244945_04245709.mRNA
AGTGTACGAGCCAAAAGATTTTTTCACTTTTTCCAGTTTGTTGAGGCAAATCAGCATTATGTCTACAGTGGACAGGGAAGTTGTTCTGGAGGCGCTGTCTGTCCTCGTTGGAACAACTGTGAAGCCTCGCAATGGATTAGCTGGAAAGTTGGATCCTAATGAACTCAATATACATAATTTTCTGCCAAAAGGATTCCTCAAACAAATTGCAGATCTGTTTAATAATCATCTGCAACAAGCAACACTGGTAGGTTTCAACTCAGATGTACGTGAGGAGATGTTTGTGGACATGGATGAATTCTTCGAACCTCGCTTTGATTATGATTTCACACATTTAAGTGACAAGTCAGTATGCATGCGGGGTGGTGAGCCATATAAACGTCCATGTGGATGGTACCGCATTGCTCTCAAAGTCCTGAACAAGTACCCTGATGGAAACGCCTGGCTGGGCACAGATGGATGGAGGAGTCACTCAGTGGCTGGTGAGTGGCCCATCTCTTATCATGGAACCAGTGTTGATGGTGCTAAAGGTATTGTCAAATCCCATTACAAAGCAGGTCCTAGACAATTCTACGGTAGAGGAATCTATTCAACATACGACATAGATCAGGCTTCTGGCTACAGCACGGAATTTACATCCAAAAAGACCGGGAAGAGATACAGAGTCTTGATGCAGAACAGGATCAATCCAAAGATGAGGAAAGTGTGTGACAGACAGGACTACTGGCTGATTGAGATTCCTGAAGCCACATCTGCTGCTGAAGAGGAGGAGATCGTGGAGAAGTCCATTCGTCCTTATGGGATTCTGCTGAAAGAGGTGTGAGAGAGGAATCCAAACCAGCTGACTGGGATCTTCATTATGATGTTTGTTTTCATTGTTAATTTCTATATATAAAGTACATAATTGGTGGAACAGGTCATATTGTTATCAAATGATAGACCTTTTTAAATTTGCTCTGCCTTAATTAAAATAGAATATGTATCCTCAATGGTATAGAAAGTCTGTGATATATTAATATTATATATTATAATTTACAAACTTTTTTCAATTAATCAGAACCAGAAAATTTTGATATGTAAAATTATAAAATTATATAATATATAAAATTCTAATATACATTGTTAGCACTTAATGTGATGTGTTAAAGAACAAATCTGACTGTTATCCTTGTTGATTTTAGTCATAATAGAAGACGAATTTGCATTGCATTCTGTTTTCAAGCGTTCAACTGCATTCAAATTATGTGAGTAATTATGTTAGTTTTCCTTAGTTTAAAACCTAAAATATTGGTAACTATATAAAGTTGCATATGATTAATCACCACCAGTGATCACTGCAGGTAAACACAAATGTGTGACCAGATTTGATTCATGTATACTTTGGACATACAGTATACTTGCCTTTTGTAACCACTGCAATACTTTCGAACAATTTGTCTTAATGAAATATGTTTCCTACATGTTAGTGACATTTAATAAA

Function

NR:

description
hypothetical protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_04244945_04245709.mRNA True 1480 mRNA 0.37 1 4244288 4245767

Neighbor

gene id symbol gene type direction distance location
CI01000024_04128028_04128273 NA coding downstream 115760 4127069 ~ 4128528 (-)
CI01000024_03964560_03976364 VPS16 coding downstream 267924 3964254 ~ 3976364 (-)
CI01000024_03957940_03962240 RGN coding downstream 282048 3957504 ~ 3962240 (-)
CI01000024_03950623_03954365 NA coding downstream 289896 3949910 ~ 3954392 (-)
CI01000024_03945597_03947286 NA coding downstream 297002 3945535 ~ 3947286 (-)
CI01000024_04262881_04279056 USP40 coding upstream 16786 4262553 ~ 4279217 (-)
CI01000024_04280957_04294789 TSPEARA coding upstream 34667 4280434 ~ 4294789 (-)
CI01000024_04306066_04310552 UBE2G2 coding upstream 59877 4305644 ~ 4310552 (-)
CI01000024_04315852_04316615 NA coding upstream 69887 4315654 ~ 4316677 (-)
CI01000024_04453773_04455276 NA coding upstream 207939 4453706 ~ 4455276 (-)
G123798 NA non-coding downstream 122783 4117550 ~ 4121505 (-)
G123835 NA non-coding downstream 132468 4111496 ~ 4111820 (-)
G123837 NA non-coding downstream 164569 4079375 ~ 4079719 (-)
G123833 NA non-coding downstream 187506 4056577 ~ 4056782 (-)
G123822 NA non-coding downstream 201139 4042891 ~ 4043149 (-)
G123918 NA non-coding upstream 77075 4322842 ~ 4323121 (-)
G123919 NA non-coding upstream 77357 4323124 ~ 4323354 (-)
G123751 NA non-coding upstream 81104 4326871 ~ 4331708 (-)
G123929 NA non-coding upstream 161527 4407294 ~ 4407896 (-)
G123936 NA non-coding upstream 200636 4446403 ~ 4446703 (-)
CI01000024_03938368_03941795 NA other downstream 302364 3938315 ~ 3941924 (-)
G123233 NA other downstream 1689252 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 3417437 824968 ~ 838550 (-)
G125457 NA other upstream 3111470 7357237 ~ 7358104 (-)
G125798 NA other upstream 3729900 7975667 ~ 7976047 (-)

Expression


Co-expression Network