XLOC_008304


Basic Information

Item Value
gene id XLOC_008304
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 6785649 ~ 6786055 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018756
GTCAAGTCAGATTAGTTAGGTGGAGTAAATCCTATAATCCGTTTTATGAGGTGTGAGTATTAGGTCTAAGTGTTAGAAACAGTGAGACACATGCACAGGAAAGGTGGATCAAGAAATCTGAGAAGGTACAATACGCGATTTTGGAACGAATATTAAAGTCTGTTTCCACCCGGAATATTATCAACAAATTACGGAGAAACATTGCAGGGATTAAAAATGAGGCATCTTCACAAAATCCAAATTGGGCGGGGACAGGCTTCTCAGATGTTTTTCGTGGTCAGGTAGGAGTTTACAACCTATTTTGCATTTACTTTTCAAATAATCAAGTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018756 True 329 lncRNA 0.38 2 6785649 6786055

Neighbor

gene id symbol gene type direction distance location
XLOC_008303 si:ch1073-228b5.2 coding upstream 684 6773876 ~ 6784965 (+)
XLOC_008302 CU694757.1 coding upstream 13529 6770586 ~ 6772120 (+)
XLOC_008301 CU633984.1 coding upstream 58567 6678521 ~ 6727082 (+)
XLOC_008300 nop53 coding upstream 119346 6652396 ~ 6666303 (+)
XLOC_008299 CU655863.1 coding upstream 226464 6559050 ~ 6559185 (+)
XLOC_008305 sirt2 coding downstream 702 6786757 ~ 6807963 (+)
XLOC_008306 NA coding downstream 81221 6867276 ~ 6875548 (+)
XLOC_008307 foxl2a coding downstream 268699 7054754 ~ 7058214 (+)
XLOC_008308 pik3cb coding downstream 278764 7064819 ~ 7161877 (+)
XLOC_008309 her8.2 coding downstream 390127 7176182 ~ 7178865 (+)
XLOC_008463 BX663520.1 misc downstream 14466136 21252191 ~ 21252282 (+)
XLOC_008297 NA non-coding upstream 625146 6159009 ~ 6160503 (+)
XLOC_008292 BX088654.1 non-coding upstream 930424 5855111 ~ 5855225 (+)
XLOC_008311 NA non-coding downstream 948434 7734489 ~ 7737531 (+)
XLOC_008312 CR589941.1 non-coding downstream 1019724 7805779 ~ 7805920 (+)
XLOC_008317 CR293508.2 non-coding downstream 1896767 8682822 ~ 8682937 (+)
XLOC_008318 CR293508.3 non-coding downstream 1945697 8731752 ~ 8731866 (+)

Expression


Co-expression Network