XLOC_008312 (CR589941.1)


Basic Information

Item Value
gene id XLOC_008312
gene name CR589941.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 7805779 ~ 7805920 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016691
aaaaaaaaaaaaaaaattgttgaatgaacatgatttaatcgtggcaccctttatgcatctaatccaatcaagtaaacctgaactgctttgaacatgttgtatgaacacaaagcacatttgtagataaaacatggtttcaata

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097641

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016691 True 142 lncRNA 0.30 1 7805779 7805920

Neighbor

gene id symbol gene type direction distance location
XLOC_008311 NA coding upstream 68248 7734489 ~ 7737531 (+)
XLOC_008310 her13 coding upstream 615596 7187228 ~ 7190183 (+)
XLOC_008309 her8.2 coding upstream 626914 7176182 ~ 7178865 (+)
XLOC_008308 pik3cb coding upstream 643902 7064819 ~ 7161877 (+)
XLOC_008307 foxl2a coding upstream 747565 7054754 ~ 7058214 (+)
XLOC_008313 cadm2b coding downstream 186986 7992906 ~ 8151485 (+)
XLOC_008314 mipep coding downstream 386795 8192715 ~ 8235529 (+)
XLOC_008315 egln2 coding downstream 529680 8335600 ~ 8382997 (+)
XLOC_008316 tmem160 coding downstream 588899 8394819 ~ 8400091 (+)
XLOC_008317 CR293508.2 coding downstream 876902 8682822 ~ 8682937 (+)
XLOC_008463 BX663520.1 misc downstream 13446271 21252191 ~ 21252282 (+)
XLOC_008306 NA non-coding upstream 930231 6867276 ~ 6875548 (+)
XLOC_008304 NA non-coding upstream 1019724 6785649 ~ 6786055 (+)
XLOC_008302 CU694757.1 non-coding upstream 1033659 6770586 ~ 6772120 (+)
XLOC_008301 CU633984.1 non-coding upstream 1078697 6678521 ~ 6727082 (+)
XLOC_008318 CR293508.3 non-coding downstream 925832 8731752 ~ 8731866 (+)
XLOC_008319 NA non-coding downstream 956554 8762474 ~ 8765029 (+)
XLOC_008321 CR925772.1 non-coding downstream 1233130 9039050 ~ 9039164 (+)
XLOC_008325 CU467862.1 non-coding downstream 1399344 9205264 ~ 9211131 (+)

Expression


Co-expression Network