XLOC_008314 (mipep)


Basic Information

Item Value
gene id XLOC_008314
gene name mipep
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 8192715 ~ 8235529 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016694
GATTCGCTTCATTTTCACTTTCCCTTTAAACTCGCTGTGACCTCCTTAGGCATTTGTTCAATAATCAGACCATACTGTAATTAACTACTgttttaaaaaggcaaaaaattaaGCTGTACCCCATCAGCAATTGATTTCCAAAGTTTCcccttatttatttacatttcgaAAGTGCTGCTGTGAAATTCACCCACTCGCTGTCATTGGAATAGCATGGCATGTGTGTTTTCCTAACCCCCCTCAAACTTGCGTTGTCCTGAGCTTTAAGTGTGTCCGAGTTGTTCAGTTTAATTGCTTTAGTCGTCGGGTACTTTTCTGGCTGTGAAAGAGGGAATTGTCTACAGTAATGTCGGTGTCCCGCGTCAGACCGCTGGTGTGTTTGTTTGGGCGCGGGGCAGCGGTGAGACTCTGCCGGACAGTGAGCACCTGGTCACCGGTAGGAGCCGCTTTCAACGCCAAAGTCCAGAGGAGGCTCGAGCTCTTCCAGCAGAATGTGggTCTGTTTGGGGTCCCGGAGCTCAGCTCGGTGGATGGTTTTGAGGTGGTACAGGATCGAGCCCTGCAGGAGACAGAGCAGCTAGTAGAGGAAGCCTGTCGCTGCCCTGCTGGAGTCCAGACTGTGCAGATATTTGACAAGCTCTCAGACAGCCTGTGTAGAGTGGCTGACATGgCAGACTTTATTAAAGTAGCTCATCCTGACCCATCATACCGAGAAGCAGCAGAGAAGACTTGCATAAACATTGGCACCATGGTGGAGAGGCTCAATACCAATGTTGAATTGTGTAAAAGCTTAAAGGACTTGTTGGACAACAAAGAGGTCATGTCTAAACTGGACCCGGAGACAAGACGAGTAGCTGAGCTCTTCATGTTTGACTTTGAGATAAGTGGAATTCATCTGGATACAAAAAAGAGGAAAGAGGCAGTGAACTTGAATGTGAAGCTGCTGGATCTGAGCAATCAGTTTCTGATGAGCTGCCACATGCCCAACAGGATCGAGAAGAAAGCTCTTCCTGAACATATTCACCAGCACTTCACCAAAGACGGGAAATACATTCAGATCGGAGGCCTGCATGCTGATGCACCTGATGACCTGgttAGGGAAGTTGCATATAAAGTTTTTCTCTACCCAAATGCAAATGTGATGCATATACTCGAAGAACTGCTGGCCTGTAGGGATAAACTGGCTCGCTTGGTTGGTTATGAATCCTATGCACACAGAGCATTAAAGGGAACTATGGCCAAAAGCCCAGAGGCCGTTATGAACTTTTTACAGCAAATCACAGACAAGCTCGCAGACAGGACAGAAAAGGATTTTAAAATGATGAGGGATATGAAGACAAAACTCAACCCTCAAAATTCTGAACTAATGCCATGGGACCATCCATATTTCAGTGGTGTGACACGGGCAGAAAGATTCAACATTGAGCCGAGTCTGTACAGTCCGTACTTCTCGCTGGGAGCATGTATGGAGGGTCTGAATGGTGTTTTCACTCAGCTGTATGGCGTGTCGCTGCTGGCGGAGCAGCCCAGCGTGGGGGAGGTCTGGAGCGAAGACGTGCGCAAGCTGGTGAGCTCACACCTCTGTGATCCATTATCAGATCCAGTGGGCCAAAATCAGAGCTCATCTTCAAGTCATTTTGAATCCTTCTTTCAGGCTGTGGTGCATGAAACAGAGGGACTGCTGGGATATATCTACTGTGACTTCTTTTACAGACAAGACAAACCTCATCAGGATTGCCACTTCACCATTCGTGGTGGAAGGCGCCTGGACGATGGTCAGTATCAGCTGCCGATGGTGGTCCTAATGCTGAATCTGCCCCATCCCACACGGGCCAGTCCCACTCTACTCAGTCCAGGCATGATGGAGAATCTATTCCATGAGATGGGTCACGCCATGCACTCAATGCTGGGACGCACACGCTACCAACATGTAACGGGAACTCGATGTGCCACTGATTTCGCCGAGGTGCCCTCTATTCTAATGGAGTACTTTGCTACAGATTATCGTGTCATCAGTCAGTTTGCTCGCCACTACCAGACTGGACAGCCTTTGCCACAGAGCATGGTGGCCCGTCTTTGTGAGTCCAAGAAAGTCTGTGGTGCAGCTGACACTCAACTTCAGGTTTTCTATTCAGTGCTGGATCAAGTTTATCATGGAAAACCACAAAATCGTTCAACAACAGACATCATGATAGACTTGCAGAAGAAGTATTATGGTCTGCCATATGTCGCCAACACAGCCTGGCAGCTGAGGTTCAGTCATCTCATTGGCTACGGGGCCAAATACTACTCGTACCTGATGTCACGGGCCGTGGCCTCTATGGTGTGGAAGCAGTGTTTTTATAAAGACCCCCTGAACAGGGAAACCGGAGAGCGCTACCGGCGAGAGATGCTGGCTCATGGGGGAGGGAAGGAGCCCATGCTGATGGtggaagGCATGTTGCAGAAACGACCCTCCATGGAGGACTTTGTGAAGGCCCTCGTATCTGATCTGGACCCCGACTTTGAAACCTTCATCATGGACTCAGAAGCCTGACAGAAGATGTTTCAG
>TCONS_00016695
GCTTCATTTTCACTTTCCCTTTAAACTCGCTGTGACCTCCTTAGGCATTTGTTCAATAATCAGACCATACTGTAATTAACTACTgttttaaaaaggcaaaaaattaaGCTGTACCCCATCAGCAATTGATTTCCAAAGTTTCcccttatttatttacatttcgaAAGTGCTGCTGTGAAATTCACCCACTCGCTGTCATTGGAATAGCATGGCATGTGTGTTTTCCTAACCCCCCTCAAACTTGCGTTGTCCTGAGCTTTAAGTGTGTCCGAGTTGTTCAGTTTAATTGCTTTAGTCGTCGGGTACTTTTCTGGCTGTGAAAGAGGGAATTGTCTACAGTAATGTCGGTGTCCCGCGTCAGACCGCTGGTGTGTTTGTTTGGGCGCGGGGCAGCGGTGAGACTCTGCCGGACAGTGAGCACCTGGTCACCGGTAGGAGCCGCTTTCAACGCCAAAGTCCAGAGGAGGCTCGAGCTCTTCCAGCAGAATGTGggTCTGTTTGGGGTCCCGGAGCTCAGCTCGGTGGATGGTTTTGAGGTGGTACAGGATCGAGCCCTGCAGGAGACAGAGCAGCTAGTAGAGGAAGCCTGTCGCTGCCCTGCTGGAGTCCAGACTGTGCAGATATTTGACAAGCTCTCAGACAGCCTGTGTAGAGTGGCTGACATGgCAGACTTTATTAAAGTAGCTCATCCTGACCCATCATACCGAGAAGCAGCAGAGAAGACTTGCATAAACATTGGCACCATGGTGGAGAGGCTCAATACCAATGTTGAATTGTGTAAAAGCTTAAAGGACTTGTTGGACAACAAAGAGGTCATGTCTAAACTGGACCCGGAGACAAGACGAGTAGCTGAGCTCTTCATGTTTGACTTTGAGATAAGTGGAATTCATCTGGATACAAAAAAGAGGAAAGAGGCAGTGAACTTGAATGTGAAGCTGCTGGATCTGAGCAATCAGTTTCTGATGAGCTGCCACATGCCCAACAGGATCGAGAAGAAAGCTCTTCCTGAACATATTCACCAGCACTTCACCAAAGACGGGAAATACATTCAGATCGGAGGCCTGCATGCTGATGCACCTGATGACCTGgttAGGGAAGTTGCATATAAAGTTTTTCTCTACCCAAATGCAAATGTGATGCATATACTCGAAGAACTGCTGGCCTGTAGGGATAAACTGGCTCGCTTGGTTGGTTATGAATCCTATGCACACAGAGCATTAAAGGGAACTATGGCCAAAAGCCCAGAGGCCGTTATGAACTTTTTACAGCAAATCACAGACAAGCTCGCAGACAGGACAGAAAAGGATTTTAAAATGATGAGGGATATGAAGACAAAACTCAACCCTCAAAATTCTGAACTAATGCCATGGGACCATCCATATTTCAGTGGTGTGACACGGGCAGAAAGATTCAACATTGAGCCGAGTCTGTACAGTCCGTACTTCTCGCTGGGAGCATGTATGGAGGGTCTGAATGGTGTTTTCACTCAGCTGTATGGCGTGTCGCTGCTGGCGGAGCAGCCCAGCGTGGGGGAGGTCTGGAGCGAAGACGTGCGCAAGCTGGCTGTGGTGCATGAAACAGAGGGACTGCTGGGATATATCTACTGTGACTTCTTTTACAGACAAGACAAACCTCATCAGGATTGCCACTTCACCATTCGTGGTGGAAGGCGCCTGGACGATGGTCAGTATCAGCTGCCGATGGTGGTCCTAATGCTGAATCTGCCCCATCCCACACGGGCCAGTCCCACTCTACTCAGTCCAGGCATGATGGAGAATCTATTCCATGAGATGGGTCACGCCATGCACTCAATGCTGGGACGCACACGCTACCAACATGTAACGGGAACTCGATGTGCCACTGATTTCGCCGAGGTGCCCTCTATTCTAATGGAGTACTTTGCTACAGATTATCGTGTCATCAGTCAGTTTGCTCGCCACTACCAGACTGGACAGCCTTTGCCACAGAGCATGGTGGCCCGTCTTTGTGAGTCCAAGAAAGTCTGTGGTGCAGCTGACACTCAACTTCAGGTTTTCTATTCAGTGCTGGATCAAGTTTATCATGGAAAACCACAAAATCGTTCAACAACAGACATCATGATAGACTTGCAGAAGAAGTATTATGGTCTGCCATATGTCGCCAACACAGCCTGGCAGCTGAGGTTCAGTCATCTCATTGGCTACGGGGCCAAATACTACTCGTACCTGATGTCACGGGCCGTGGCCTCTATGGTGTGGAAGCAGTGTTTTTATAAAGACCCCCTGAACAGGGAAACCGGAGAGCGCTACCGGCGAGAGATGCTGGCTCATGGGGGAGGGAAGGAGCCCATGCTGATGGtggaagGCATGTTGCAGAAACGACCCTCCATGGAGGACTTTGTGAAGGCCCTCGTATCTGATCTGGACCCCGACTTTGAAACCTTCATCATGGACTCAGAAGCCTGACAGAAGATGTTTCAGGTTAGCTTGAGCGCTGTGTAATATCATATGTCAGTTAACATAACTTAGATTAATGCTTTACAACTGGCTGAACTATCAGTACTCTTTGTGTTGACAAATTTGAATGGCAAAAACTGTTAAGAACTCGCCCAGGTCATATTTTTTTACATCCTTGAAGAAAAGATTGAATATTATCTTGACATTAAAAAGTACCAAAAATCCTAGTGcagaatatttaaatattcaagaTAATACTTACTGTTTGTATTGTATTACCTGAAATATActgctatataaaatatattaaacagggaaatgtttaatttaatttaaaatagaaatgttagctatcaatatgaatattattaataaatgaatcagatattttatttaatattatataatttttcatCTGATTTTGGGttgaaatatgaccttttttgtaatatatttacatattcatatgTAACGTAGGTTAATTAATGTTGCTGAAAGATATTAAACTCATTGTTTGTACTGTATAAAGGGGGAAAACAGTGTTTTGGATTGTAAAGCGTGCATAATTTGTCACTTAATGGTGTAATAAAATGCACTTTTGACTCCA

Function

symbol description
mipep Predicted to enable metalloendopeptidase activity. Predicted to be involved in peptide metabolic process and protein processing involved in protein targeting to mitochondrion. Located in mitochondrion. Implicated in combined oxidative phosphorylation deficiency 31.

GO: NA

KEGG:

id description
ko01002 Peptidases and inhibitors
ko03029 Mitochondrial biogenesis

Ensembl:

ensembl_id ENSDARG00000055344

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016694 False 2551 mRNA 0.49 18 8192715 8234946
TCONS_00016695 True 3042 mRNA 0.45 19 8192720 8235529

Neighbor

gene id symbol gene type direction distance location
XLOC_008313 cadm2b coding upstream 41230 7992906 ~ 8151485 (+)
XLOC_008312 CR589941.1 coding upstream 386795 7805779 ~ 7805920 (+)
XLOC_008311 NA coding upstream 455184 7734489 ~ 7737531 (+)
XLOC_008310 her13 coding upstream 1002532 7187228 ~ 7190183 (+)
XLOC_008309 her8.2 coding upstream 1013850 7176182 ~ 7178865 (+)
XLOC_008315 egln2 coding downstream 100071 8335600 ~ 8382997 (+)
XLOC_008316 tmem160 coding downstream 159290 8394819 ~ 8400091 (+)
XLOC_008317 CR293508.2 coding downstream 447293 8682822 ~ 8682937 (+)
XLOC_008318 CR293508.3 coding downstream 496223 8731752 ~ 8731866 (+)
XLOC_008319 NA coding downstream 526945 8762474 ~ 8765029 (+)
XLOC_008463 BX663520.1 misc downstream 13016662 21252191 ~ 21252282 (+)
XLOC_008306 NA non-coding upstream 1317167 6867276 ~ 6875548 (+)
XLOC_008304 NA non-coding upstream 1406660 6785649 ~ 6786055 (+)
XLOC_008302 CU694757.1 non-coding upstream 1420595 6770586 ~ 6772120 (+)
XLOC_008321 CR925772.1 non-coding downstream 803521 9039050 ~ 9039164 (+)
XLOC_008325 CU467862.1 non-coding downstream 969735 9205264 ~ 9211131 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000308_01667660_01683460 MIPEP coding CI01000308 null 1667660 ~ 1683598 (+)