XLOC_008343 (BX324136.1)


Basic Information

Item Value
gene id XLOC_008343
gene name BX324136.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 11565391 ~ 11565509 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016731
catcacagccatatcaccctgtagcccaagaccggttactcactgaagctaagcagggttgagaCTGTTCAGTAactggatgggaaaccacatggaaaaactaggttgctgtcggaGGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101761

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016731 True 119 rRNA 0.50 1 11565391 11565509

Neighbor

gene id symbol gene type direction distance location
XLOC_008342 ndufc2 coding upstream 122177 11427620 ~ 11443214 (+)
XLOC_008341 si:ch73-321d9.2 coding upstream 171069 11381532 ~ 11394322 (+)
XLOC_008340 CR538726.1 coding upstream 260317 11303325 ~ 11305074 (+)
XLOC_008339 BX323573.1 coding upstream 698831 10863850 ~ 10866560 (+)
XLOC_008337 CT573316.1 coding upstream 808448 10750208 ~ 10756943 (+)
XLOC_008344 slc1a5 coding downstream 78150 11643659 ~ 11671173 (+)
XLOC_008345 NA coding downstream 117580 11683089 ~ 11691460 (+)
XLOC_008346 strn4 coding downstream 128115 11693624 ~ 11757647 (+)
XLOC_008347 FO704748.1 coding downstream 249460 11814969 ~ 11820549 (+)
XLOC_008348 prkd2 coding downstream 259857 11825366 ~ 11875820 (+)
XLOC_008463 BX663520.1 misc downstream 9686682 21252191 ~ 21252282 (+)
XLOC_008338 NA non-coding upstream 810626 10752071 ~ 10754765 (+)
XLOC_008336 CU856523.1 non-coding upstream 1078196 10485534 ~ 10487195 (+)
XLOC_008350 CR848025.2 non-coding downstream 416941 11982450 ~ 11986634 (+)
XLOC_008351 NA non-coding downstream 439294 12004803 ~ 12009399 (+)
XLOC_008353 NA non-coding downstream 493731 12059240 ~ 12362508 (+)
XLOC_008356 NA non-coding downstream 942290 12507799 ~ 12525596 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G86381 NA non-coding CI01000014 null 417291 ~ 419506 (-)