XLOC_008357



Basic Information


Item Value
gene id XLOC_008357
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 12620107 ~ 12621628 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00018906
GTGTTAACATCCGGTGTCATGttcaaagaaaaaaacacagagcAGATCCAATCGcagcatttaaacatttaatgaaagAACTATGACATGACAAGACAagacaaactaaaacaaaccagGAATAAACAGACATCATGGGAGCAACTCAAACAACAGACCATGAGAAGGGTACACAATCTGAAATATatagtcctggggcctcatTGGGAATGAGCTGCAGCTGTGAATGTGTGCGCGTGGGAGAGTGTCTGGATGACGGTCAGCTGGAGCAGGTGTTGATTGGTGCAATGAATTCTGGTCATGGTAGTTTATGTGGTGTGTGTAGTTCATGTGGATTTCTACCAGTGATCTCCGGATGCTGGATCGTGAAAGTGACAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00018906 True 378 lncRNA 0.44 2 12620107 12621628

Neighbor


gene id symbol gene type direction distance location
XLOC_008356 NA coding upstream 94511 12507799 ~ 12525596 (+)
XLOC_008355 tmprss4a coding upstream 160772 12429206 ~ 12459335 (+)
XLOC_008354 il10ra coding upstream 231673 12377887 ~ 12388434 (+)
XLOC_008353 NA coding upstream 257599 12059240 ~ 12362508 (+)
XLOC_008352 FO904901.1 coding upstream 565361 12030367 ~ 12054746 (+)
XLOC_008358 NA coding downstream 379565 13001193 ~ 13136464 (+)
XLOC_008359 CABZ01009248.1 coding downstream 799886 13421514 ~ 13509368 (+)
XLOC_008360 CABZ01009247.1 coding downstream 903246 13524874 ~ 13524988 (+)
XLOC_008361 CABZ01056919.1 coding downstream 1336094 13957722 ~ 13957850 (+)
XLOC_008362 zgc:162730 coding downstream 1363251 13984879 ~ 13986761 (+)
XLOC_008463 BX663520.1 misc downstream 8630563 21252191 ~ 21252282 (+)
XLOC_008351 NA non-coding upstream 610708 12004803 ~ 12009399 (+)
XLOC_008350 CR848025.2 non-coding upstream 633473 11982450 ~ 11986634 (+)
XLOC_008345 NA non-coding upstream 928647 11683089 ~ 11691460 (+)
XLOC_008363 BX927244.2 non-coding downstream 1423493 14045121 ~ 14053466 (+)

Expression



Co-expression Network