XLOC_008372 (or130-1)


Basic Information

Item Value
gene id XLOC_008372
gene name or130-1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 14826966 ~ 14853579 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016772
TTGCGGTTCTTAATGTCAGATGTGTGCAGAATGTCCAGTTATAACAGCAGTGGCGATGAGCAGATGCAGCTGATTCAGGTGGACCCCGTGCGGAGGAACATCTCACTGGCGCTGACACAGGTCATCGTGTGGCCCTTTATCTATCTCATCTTCCTCATGCTCCTCATATTCTCCAAGAAAGAGACTTTTACAACTGAAATGCGCTATATATTGTTCGGACACTCTTTGTTAGTAGACTTAACGTTTCTTCTTTTGACGGATTTTGTGGTGCTTTTGTCATACAACCTTGTTTTATTACCTCTGCAGTTCTGCATCCCTGTTTGCATGTTTATAGAAACAGTGGCAGTAAGTGCACCTCTGACCGTCGGCGCCATGTGTGTGGAGCGTTATGTGGCCATTTGCCTGCCTCTTAGACACCATGCCATCTCCACCTCCAGAAGAGCCTTCATGGTGATTTTAATGATCTGGATCGTGAGCTCCATAAACCCGTTTATTGACATGTTCATTCTCGTCAGCACAGCCTCTCATGAATACTTGACTCAGCTCACACACTGCCACTATGAGATTATGATCCCTGAAAAGATCCGCGTGTTTGCCAGGGGGTTGTTGTACATTGTGGGGCTCgtggttattttaataattgagatattttgctatgtaaTGATTTATCTCGCTGCTCGTGCTGCATCTGGTGACAATAAGAAATCTGCGTCGAAAGGGCAGCGCACTATTTCCCTGCACATACTTCAGCTGTTTTTATGCACTGCAGAGGTGATGTGCCCTTACATTGAGTCTGTGGTCATGCAGTATGATATTCAGTCATATCTGACTGTACGATTTATAAACTTCCTGGCATTCAGCATCACTTCTAGAGCGGTCAGTCCTCTTGTGTATGGATTTAGAGATGAGAAATTTTATACAGCGATGGTTTACTTTATCAGAtgcaaaaacaacacaatctctTCTGACATTGATAAGCAAACAtgaaatacatgtttttaaaggTTAAACTTATGCTAAAACATCTATTGACTTTactaaatgtaactgaaaaatgttatgtaatttaaaataaattagatcaTTTTTATTGAGAGCATCACAAAAGCCTCTTGATGCATATTTTTGAATGACTTGCTTTACTAAGTTGTACTTATTTGTTTGTGCATATTAACTGCATTACtgaaatatgaagagttcagatgcaaaaacctctaaatgccatctaaacTTTTTTTCTCAGGCTCTTGTGGGTATAGTCATTTTAATTATATGTCAATAAAAAGGGTATTTTCATTGCCTGTAAAGTGAAATAACTTCACATAAACAGAAGATTGGGAAAAAATTTCAAGATtgggaaaaaagtttttgcatctgaactttagATTTTAAAATTGTTAGATACAGTTAGCAGATTAACTTGTATTTaaccatttatttataattacagatTTTAATGGCCTAATGATATATTATGTATAATTATTAGATTTTTAGATTGATGTTCATTTCAAATGTTCACACTGGAAAATAAGTCGGATTCACAGATAAGTGTATGCAACATGTAATTACATAAAGTTATCTTTGTCTCTTTTTTTAGCTAAATAGgtatttagaatttttatttgacaaagaCATCATTGTTGTTTGCTATTAATAAAATGTGTCTCATAAGTGATATGTTGGTAATAATAGCAAATACAATACAAACAACCAAGTGTCACactcaaaacatttcattttatatttattgaggATAAACTGgatcatatttaataatttaaacacaCTTAATAAAAGAGTGTGTCTGCTGTGTCCTGTTCAGTActcatttgtttttgtctttttttaattttttttacatactgtactgtaaatatcATATTGTTTcctttaacaacacacatgaCCAAATCAACTTGAAATAAACCAAGTACTCCCTTTTTCATCTCA
>TCONS_00016773
ATGTCCAGTTATAACAGCAGTGGCGATGAGCAGATGCAGCTGATTCAGGTGGACCCCGTGCGGAGGAACATCTCACTGGCGCTGACACAGGTCATCGTGTGGCCCTTTATCTATCTCATCTTCCTCATGCTCCTCATATTCTCCAAGAAAGAGACTTTTACAACTGAAATGCGCTATATATTGTTCGGACACTCTTTGTTAGTAGACTTAACGTTTCTTCTTTTGACGGATTTTGTGGTGCTTTTGTCATACAACCTTGTTTTATTACCTCTGCAGTTCTGCATCCCTGTTTGCATGTTTATAGAAACAGTGGCAGTAAGTGCACCTCTGACCGTCGGCGCCATGTGTGTGGAGCGTTATGTGGCCATTTGCCTGCCTCTTAGACACCATGCCATCTCCACCTCCAGAAGAGCCTTCATGGTGATTTTAATGATCTGGATCGTGAGCTCCATAAACCCGTTTATTGACATGTTCATTCTCGTCAGCACAGCCTCTCATGAATACTTGACTCAGCTCACACACTGCCACTATGAGATTATGATCCCTGAAAAGATCCGCGTGTTTGCCAGGGGGTTGTTGTACATTGTGGGGCTCgtggttattttaataattgagatattttgctatgtaaTGATTTATCTCGCTGCTCGTGCTGCATCTGGTGACAATAAGAAATCTGCATCGAAAGGGCAGCGCACTATTTCCCTGCACATACTTCAGCTGTTTTTATGCACTGCAGAGGTGATGTGCCCTTACATTGAGTCTGTGGTCATGCAGTATGATATTCAGTCATATCTGACTGTACGATTTATAAACTTCCTGGCATTCAGCATCACTTCTAGAGCGGTCAGTCCTCTTGTGTATGGATTTAGAGATGAGAAATTTTATACAGCGATGGTTTACTTTATCAGAtgcaaaaacaacacaatctctCAATTACATGAATAA
>TCONS_00016774
GGAATACAGAACTTGGATAGCCACAGTAGGCTATGTTGATTGCATATTGTAATTAGCCTGCTGAGGAATGTCAATTATGCCACTTATTAGTTTTTTCCTGTTTCTTTTCTGTCAGATGTGTGCAGAATGTCCACTCATAACAGCAGTGGCGATGAGCAGATGCAGCTGATTCAGGTGGACCCCGTGCGGAGGAACATCTCACTGGCGTTGACGCAGGTCATTGTGTGGCCCTTCATCTATCTCATCTTCCTCATGCTCCTCATATTCTCCAAAAAGGAGACTTTCACAACTGAGACTCGCTATATACTGTTCGGACACTCTTTGTTGGTCGACCTGATATTTATTTGCCTGACAGACCTTGTGGTGCTTTTGTCATACAACCTTGTTTTATTACCTCTGCATTTCTGTATCCCCATCTGCATGCTAATGGAGGCTGTCACAGCATGTGCTCCACTGACCATCATAGCCATGTGTGTGGAGCGTTATGTGGCCATTTGCCTGCCTCTTAGACACCATGCCATCTCCACCTCCAGAAGAGCCTTCATGGTGATTTTAATGATCTGGATCGTGAGCTCCATAAACCCGTTTATTGACATGTTCATTCTCGTCAGCACAGCCTCTCATGAATACTTGACTCAGCTCACACACTGCCACTATGAGATTATGATCCCTGAAAAGATCCGCGTGTTTGCCAGGGGGTTGTTGTACATTGTGGGGCTCgtggttattttaataattgagatattttgctatgtaaTGATTTATCTCGCTGCTCGTGCTGCATCTGGTGACAATAAGAAATCTGCATCGAAAGGGCAGCGCACTATTTCCCTGCACATACTTCAGCTGTTTTTATGCACTGCAGAGGTGATGTGCCCTTACATTGAGTCTGTGGTCATGCAGTATGATATTCAGTCATATCTGACTGTACGATTTATAAACTTCCTGGCATTCAGCATCACTTCTAGAGCGGTCAGTCCTCTTGTGTATGGATTTAGAGATGAGAAATTTTATACAGCGATGGTTTACTTTATCAGAtgcaaaaacaacacaatctctCAATTACATGAATAACtcaaaaataagtaaaagaaaaatGTGTAACATCTTTACATTCATATgagatttttgtttaatattcgATGCGCACTAACATGTAAATTAGCAGGTTTGAGTATTTTGTGGAtaacaagtgttttctgtttatttatggttgtgaactgcattatgggagcttgatctctgctctgttgacttttggtGTTGAAAATTTGTCAATTCAgcaaagttacttttattgacatttgtacTTTGAAATACTATTATGTACCCTGTatttgatcaattagtcctgacagcatatgtttttaggtcattacttattaaactaagttaataatgttctaacttaattttataagttatgcaagcagttttaagtcagtttcaCATAGTagaagttcaatggactcaatgattcaacttaaaaaattaaagcaactaggattttttcagtgtataagaaataatacagagagaaataagtctgaaaagaaacaaaaaatgtacagacattgaaatattatatatataatattataattttttttcaaattaagttaacttaaaagttgttgaaagaagGTCCAAatcaatgtaattttaaataaatggagggaaaaacatgaatcacacaaTACAGAAtagcatttatatttatatggttTTTGCAGTGTGgatgtttttcttgttttgttataCTTAAAAGTAATTGATAAGTGCTCCATTATGATTATCCATAACACTCTATCATATCCAGAGTTTGTATTTGTCCGGTGTCCTGACATTTACGCATCAGGTTATGCTACCACTGTATTtgacactgtatttgaatggttctgggGTTGGAGACTTGtggttagggattaggtaggttagggtgatATTCCTACAGCTTCATATCAAACTACTCCACATTAAATTTTACAccggtagcaaaatctgatgggtagcatattgcattattaaaatgtgCATCCTACTTTTAGAATGGAAGGTAGAACAATCTGACAAGGTATGGACACTAAGTGCTTTGGAAGGTGCCTCTCGCATTCAGTGTATTGTTTAGTAGCGACCTCTCTTGGTCGGATTGAGCATTATTTGTGGAAGAAAGACTTTTCCTTTACATTATATTGACTTAAAAGATGTGTAAAAAAGATTTATTGATGATAAGAATCGCATGACATGAAAGATTATTAAAGATTACACATTGCATTGTCAAATCGAGTTCATTTATGCAGTACTGCTCTGCAAAAATCACCTTAAAGTTTAACACATAAATGTTTGCACAACATAAAATCATCAGTTTAAACATTACAAATCTATTAATGCACCCTAAACATGTAGTATGTAGTTACAGTCAAACAGTCTAATCATTGAACAagagcaattatttaaataatattaaagaaatgtCGTCAATCAAATGCCATAATGTCTGCTGTGTGGCCTTTGCATTCCACTCAGGCATGATGCAATCATGACTTCAAAACAGCCTTTACTGTGCATGATTTCTCTGTATTCCTGTGACTTGGACCCTGAGCTCTATAAACCCTTTGTTTACATGTACATTCTTATACTGCTGCCTAAGATAAGCACTTGAGGGGATTCATCACTATTGTTGTCTACTTTTTTCTTTTCACAAGTGTTTAAAAGTGCTTTATGTAACACGTTTTTCTCCACCATTAAACATTTACCACA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070806-44 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000101798 ENSDARG00000104746

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016772 False 1953 mRNA 0.35 1 14826966 14828918
TCONS_00016773 False 948 mRNA 0.44 2 14826996 14851893
TCONS_00016774 True 2760 mRNA 0.36 1 14850820 14853579

Neighbor

gene id symbol gene type direction distance location
XLOC_008371 sars2 coding upstream 159871 14642641 ~ 14667095 (+)
XLOC_008370 FBXO46 coding upstream 226670 14592624 ~ 14600296 (+)
XLOC_008369 si:ch211-11n16.2 coding upstream 406402 14378829 ~ 14420564 (+)
XLOC_008368 NA coding upstream 577037 14249389 ~ 14249929 (+)
XLOC_008367 si:dkey-243k1.3 coding upstream 620901 14202114 ~ 14206065 (+)
XLOC_008373 diabloa coding downstream 1087 14854666 ~ 14858189 (+)
XLOC_008374 CR936977.2 coding downstream 7756 14861335 ~ 14964241 (+)
XLOC_008375 si:ch211-149e23.4 coding downstream 320032 15173611 ~ 15218956 (+)
XLOC_008376 med29 coding downstream 379276 15232855 ~ 15237211 (+)
XLOC_008377 c2cd3 coding downstream 405179 15258758 ~ 15311768 (+)
XLOC_008463 BX663520.1 misc downstream 6398612 21252191 ~ 21252282 (+)
XLOC_008363 BX927244.2 non-coding upstream 773500 14045121 ~ 14053466 (+)
XLOC_008361 CABZ01056919.1 non-coding upstream 869116 13957722 ~ 13957850 (+)
XLOC_008360 CABZ01009247.1 non-coding upstream 1301978 13524874 ~ 13524988 (+)
XLOC_008359 CABZ01009248.1 non-coding upstream 1317598 13421514 ~ 13509368 (+)
XLOC_008379 NA non-coding downstream 494063 15347642 ~ 15351457 (+)
XLOC_008384 NA non-coding downstream 597224 15450803 ~ 15452516 (+)
XLOC_008388 NA non-coding downstream 775927 15629506 ~ 15665686 (+)
XLOC_008390 NA non-coding downstream 925409 15778988 ~ 15782552 (+)
XLOC_008393 NA non-coding downstream 1133475 15987054 ~ 16018789 (+)

Expression


Co-expression Network