XLOC_008374 (CR936977.2)


Basic Information

Item Value
gene id XLOC_008374
gene name CR936977.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 14861335 ~ 14964241 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016779
aacGTTTTCAAATGCCATTAGGAACTAGTAGAATTAAGAAAACTTTGTCCTCTCCACCTAAAGTTTTGTGTATATACTGTGCATCATGTTCCAGAAAAGAGTTTCATACATTCAGAAAAGGGCCAATAAACATGATTGATCGGTGTAAATGGCACCACTCAGCTGGGGATTTATCACTCTTGGAagacataaataaaacacaaggatCATGGAAAGCGTGCCCAGCATGGCTCACTCTTTAATCTGAGTGAACCTGGCGACATCTCCCAGCACCCCATCGAGTCAAAGCCATGCCAATATGTCTAACTTAGTTTTGTTATGTTACAGCCTGGTCATTTCCAGCACGACCAAATGAAGTTAAAGAAACAGTTAGTAGCCTATTGCCCCCTTGAAGATAGGAGTCATTTTGCTTTTTGACTCGGAGTGCAGCCTCGTTTTCTTCATTCACTAAAAGCTCCGTCTTGTCTGACGTACGGGTGTAAAGCGGACCGCATCGCGACTCTCTGCATTGTTGACGATTTATTTTTAGTCCGAAACCGCTGCCGGACTGGAGGTTCCGCCCACACGCGGTCCGGGTCGGCTGCTGCTGCTGTGGATCCTCAAACTCCGAGTTGATTCAGCCAGGACGAGCTGAGTTCTGCAGTCTGAGACCATGGCAGAGGAAGTAAGACACTTCTTTGGGAATACCACGCTTTTCCGTCGGCTTCTACCTCTACTCGGGTTTCTGTTCAGCGCCTGTGATGGTGTGTGGTCAAACCAGGTGGTGGTTCCGGCACAGGTCACTTCAGTTCTGGGGAAGAACGTGACTCTTAGCTGCCGGATGGAGATGAGCTCGAACCTCAGTCTGACCCAGAGCTCCTGGGAGCGTCACTTGCCCTCCGGCATCATCACTCTGGCCGTCTTCAACCCTGTGTATGGGACATCTGTTGCTGATGAGTACAGCAGACGGGTGCACTTCCTCAAGCCCTCGGTACACGATGTGTCCATTGTCCTGCAGGGAGTGGGCTTTGCCGACATTGGGATGTACACCTGTAAAATGGTCACATTTGAACTCGGAAACATGCAGGCCTCCACAAATGTTGACGTTATGGtGGAGCCAAAGGTCTATGTGTCTCCGGGCTCCTTGTCTCTGACGGCGGATGATGGTGAAACTCTGGTGGCGACATGTACAGCTGAACGGGGCCGTCCCGCGGCCGAGGTGTTTTGGGAATCAGATCTGCCGGGTCAAACAGCAGTCGTCACACAGTCAGAGCCAGAGGGGACCACAACTACTCTAGTGCACTACGTCTTGGCCCCTACACGAGCCTCGCATGGCCGCTCCCTCAGCTGTGTTGTTCGTCACCCGGCCCTTTCCAGAGATTTCCGAATACCCTACCGGCTCAATGTGTTTTTTGTTCCAGATGTTATGGTGATAGGCGGGAAGAATGTGTGGTACGTTGGACAAAAAGACGTCCAGCTGGACTGTAAAGCCAATGCAAACCCACCAGCCCTGTTTTACCTTTGGACCAGGCTGGACGCACTAATGCCTGCAGGTGTAAACATGCATAATGGCAGTCTAGTGTTTACTCGTCCTTTAGAGGCGACCGACTCTGGACAATACAGGTGTGAAGTTCAGAACGATGTTGGCCAGAACTTTCATGACGTGCCCTTCTTGGTACTAGATCCTCCACCCACCACTGCAGCCCCGACCACCACCACCACCTTCTCCAAGTCCCTCCACCCCGACACCAGTTTGACTATCACGGCTCCAATCAACCAGCGGGCCCACTTTAGCTCCCCGACTCGTTCCTCTCCGCGGGACGCCGATCTGTCAACTCTCGTAGGTGGCATTGTCGGTGGGATCCTCATCCTGGTGCTGCTGTTGGCTCTAGCTGGGGCTTTCTACATGCGCCGTCGTCGGACATTCAGAGGGGACTATTATACAAAACAATACATAGGCCCATCGGACATGCAGAAGGAGTCACAACTGGATGTTCTTGAGCCGCACGAGCTTCAGGATGTTTACGGAGACGATTCGGGCAACGGCAGCCAGGATTTGAAGCCCAAGCCTGAAGGAGACATCATTTACCCTGACTATCCCAACGACCACAAAGACACGGAGGGTTGGGGCGACAATCTCAGCCTTCAGAGGGAAGCCAGTTATTATTCTGACCACCACAACCATCATAATGTGAACCCCAGTGGGCCGCCGCTGCACAACGGCTCCCCCTACCTGCGGGACGAGTGCTTCGATAATGCCACAGACAATGATTACGTGTCGCACATCGACGGGTCCGTGATCTCGCGCAGGGAATGGTATGTTTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103638

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016779 True 2305 mRNA 0.52 6 14861335 14964241

Neighbor

gene id symbol gene type direction distance location
XLOC_008373 diabloa coding upstream 3146 14854666 ~ 14858189 (+)
XLOC_008372 or130-1 coding upstream 7756 14826966 ~ 14853579 (+)
XLOC_008371 sars2 coding upstream 194240 14642641 ~ 14667095 (+)
XLOC_008370 FBXO46 coding upstream 261039 14592624 ~ 14600296 (+)
XLOC_008369 si:ch211-11n16.2 coding upstream 440771 14378829 ~ 14420564 (+)
XLOC_008375 si:ch211-149e23.4 coding downstream 209370 15173611 ~ 15218956 (+)
XLOC_008376 med29 coding downstream 268614 15232855 ~ 15237211 (+)
XLOC_008377 c2cd3 coding downstream 294517 15258758 ~ 15311768 (+)
XLOC_008378 camkk1b coding downstream 349948 15314189 ~ 15331501 (+)
XLOC_008379 NA coding downstream 383401 15347642 ~ 15351457 (+)
XLOC_008463 BX663520.1 misc downstream 6287950 21252191 ~ 21252282 (+)
XLOC_008368 NA non-coding upstream 611406 14249389 ~ 14249929 (+)
XLOC_008363 BX927244.2 non-coding upstream 807869 14045121 ~ 14053466 (+)
XLOC_008361 CABZ01056919.1 non-coding upstream 903485 13957722 ~ 13957850 (+)
XLOC_008360 CABZ01009247.1 non-coding upstream 1336347 13524874 ~ 13524988 (+)
XLOC_008359 CABZ01009248.1 non-coding upstream 1351967 13421514 ~ 13509368 (+)
XLOC_008384 NA non-coding downstream 486562 15450803 ~ 15452516 (+)
XLOC_008388 NA non-coding downstream 665265 15629506 ~ 15665686 (+)
XLOC_008390 NA non-coding downstream 814747 15778988 ~ 15782552 (+)
XLOC_008393 NA non-coding downstream 1022813 15987054 ~ 16018789 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000154_01422783_01434121 NA coding CI01000154 null 1421764 ~ 1434121 (-)