XLOC_008383 (zgc:92630)


Basic Information

Item Value
gene id XLOC_008383
gene name zgc:92630
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 15415623 ~ 15437530 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016793
AGTCATCTTGATTAGTGAAATTTACAGATATTCGTGCCAAAGAAAGACAAAGGTGAAATAAAACACTGTTGTTTAAGTGGCGCATTTCTATTGGCTGGACAGTCAGGGAGTGTTCGTTTACATAAGGCATTCATTCCGAGGACTGCAGACGGCAAGCAGTTCAGCTGTAAAGAGTTTTTGCCAAGACTGTAATGGATCGCTGGAGAGGCAGAGTTGTTCTTGTCACTGGAGCTTCAGTGGGAATAGGAGCTGCAATCGCAAAATCTCTTGTCCAGCATGGCATGAAGGTGGTCGGATGTGCCAGAAACGTGGAACAAATTAAGAAACTGGCGGCTGAATGTGTCAGTAGCGGATACAGCGGTGCTCTGTTTCCATATAAATGTGATCTTTCAGTAGAGGATGAAGTGTTGTCCATGTTCTCCTGGATCAAGGCTCAACATAAGGGTGTTGATGTGTGCATTAATAATGCTGGTTTAGCTCTGCCAGAGCCTCTGTTGAGTGGCAAAACCAGCAGCTGGAGGACTATGATGGACGTCAATGTCATGGCCCTGGCAGTGTGCACACGTGAGGCTTACCAGTCCATGAAGGAAAGAAAAGTCGATGACGGccatatcattaatattaacagTATTTGTGGACACCGTGTGCTTAACTATGCTGATGGACACTTCTACACCGCTACTAAATACGCAGTGACCGCCCTCACAGAAGGTTTGAGACAAGAGTTACGAGAGGCCAAGACACACATACGTGCCACAGGAATATCTCCTGGTATAGTGAAGACAGAATTTGCCTACCGACTCTTTAGTGATGACCAAGAAAAGGCTGCTGCTATGTATAATAGTGGTGAGTGCCTGCAAGCTGATGACATAACCAATGCAGTGGTGTATGTTCTAAGTGCTCCTCCTCACGTCCAAATCGGTGACATCGAGTTAACGCCTGTGGACCAGTCGATGTGACGTGACCAATCCAGCTAAACTGACACATTGTGACAGCGATCAAGTACAGAACACTGCTCCGTCACACACTGAAATATGAAAATAGATCATTACTGTTTAACTCattagtacagttactaacaatGTGCATTTGCTACTACTATTTAGAAACAAATAAAATGGAGATTTGGAATATGTGCCTTTGATGctcttttaaataaaagcaaaacaaaatatcagtgAAAATGCAGTATGACTGTTATTTATTGACTTAGTTTGATGTGATTGTGATGAATTTTAAAGACAAAGAACCAGTGTTGATGAACTGCAATGCTTTTTTACAACCTCTAGCTCTCAATCTATAGCTCAGCATTGCAATGGCTAATAATAATGGGTAGTAATATTCCATCACTTATGTAACAGGGACAATACACTCATAGTTGATGTTATAAATAGACAACCGATGCCCtgtacatagggcatatagcatcATTGTCTTGTATCAGATATCTTGATTAATTATTTCTGTAGCACAAAAGCATAAACC

Function

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-040718-449 Orthologous to human DHRS11 (dehydrogenase/reductase 11).

Ensembl:

ensembl_id ENSDARG00000004141

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016793 True 1485 mRNA 0.42 7 15415623 15437530

Neighbor

gene id symbol gene type direction distance location
XLOC_008382 dhrs11b coding upstream 7510 15403560 ~ 15408113 (+)
XLOC_008381 ca4b coding upstream 13706 15390882 ~ 15401917 (+)
XLOC_008380 si:ch211-105f12.2 coding upstream 33744 15375607 ~ 15381879 (+)
XLOC_008379 NA coding upstream 64166 15347642 ~ 15351457 (+)
XLOC_008378 camkk1b coding upstream 84122 15314189 ~ 15331501 (+)
XLOC_008384 NA coding downstream 13273 15450803 ~ 15452516 (+)
XLOC_008385 zgc:174895 coding downstream 19006 15456536 ~ 15460133 (+)
XLOC_008386 nek8 coding downstream 41912 15479442 ~ 15514013 (+)
XLOC_008387 traf4a coding downstream 79082 15516612 ~ 15593263 (+)
XLOC_008388 NA coding downstream 191976 15629506 ~ 15665686 (+)
XLOC_008463 BX663520.1 misc downstream 5814661 21252191 ~ 21252282 (+)
XLOC_008368 NA non-coding upstream 1165694 14249389 ~ 14249929 (+)
XLOC_008363 BX927244.2 non-coding upstream 1362157 14045121 ~ 14053466 (+)
XLOC_008361 CABZ01056919.1 non-coding upstream 1457773 13957722 ~ 13957850 (+)
XLOC_008360 CABZ01009247.1 non-coding upstream 1890635 13524874 ~ 13524988 (+)
XLOC_008390 NA non-coding downstream 341458 15778988 ~ 15782552 (+)
XLOC_008393 NA non-coding downstream 549524 15987054 ~ 16018789 (+)
XLOC_008394 BX511308.1 non-coding downstream 598339 16035869 ~ 16045504 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G361636 NA non-coding CI01000154 null 1281262 ~ 1283149 (+)