XLOC_008384


Basic Information

Item Value
gene id XLOC_008384
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 15450803 ~ 15452516 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018764
TCCTTTTAATCAAATCGTTATTGCACATGCATGCGAATATGTTCATAATGGGATAGATGTAATGGATATCTGTGTGTCTGACCGCTAGTAACCCCATCGCTCCCCACACCTCGAGATTTTTTCTTTGGTGACGCAGCAAGGAGGAGGTTCCTTTGGCGCTTTCCATAGTAACAAGAGATGGGGTGATTCTTCCGACCCAACGAGATTGGGCATTCTAATTTCACAAAAGAAATGGGTAGTGACCTAATTTGGAACAGTGGGCTTTTTCAGTGCAGACCAATCAAGATCTCCATGTAGTTATACAGAACATCAGTCAGTGTCTTTTCCTATGGTTACATGGATCTTAATGTTCGGACTCTTAACAGATGCAGGCGCCAGGAAAGCGAACAGGCGGAATTTGAGAAGAGAATGCACGTTTGTTTATAAAGAAAATGTTGCGCAGAAATCACTTGGCTGCTGTCC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018764 True 462 lncRNA 0.43 2 15450803 15452516

Neighbor

gene id symbol gene type direction distance location
XLOC_008383 zgc:92630 coding upstream 13273 15415623 ~ 15437530 (+)
XLOC_008382 dhrs11b coding upstream 42690 15403560 ~ 15408113 (+)
XLOC_008381 ca4b coding upstream 48886 15390882 ~ 15401917 (+)
XLOC_008380 si:ch211-105f12.2 coding upstream 68924 15375607 ~ 15381879 (+)
XLOC_008379 NA coding upstream 99346 15347642 ~ 15351457 (+)
XLOC_008385 zgc:174895 coding downstream 4020 15456536 ~ 15460133 (+)
XLOC_008386 nek8 coding downstream 26926 15479442 ~ 15514013 (+)
XLOC_008387 traf4a coding downstream 64096 15516612 ~ 15593263 (+)
XLOC_008388 NA coding downstream 176990 15629506 ~ 15665686 (+)
XLOC_008389 si:ch211-33e4.3 coding downstream 318902 15771418 ~ 15775182 (+)
XLOC_008463 BX663520.1 misc downstream 5799675 21252191 ~ 21252282 (+)
XLOC_008368 NA non-coding upstream 1200874 14249389 ~ 14249929 (+)
XLOC_008363 BX927244.2 non-coding upstream 1397337 14045121 ~ 14053466 (+)
XLOC_008361 CABZ01056919.1 non-coding upstream 1492953 13957722 ~ 13957850 (+)
XLOC_008360 CABZ01009247.1 non-coding upstream 1925815 13524874 ~ 13524988 (+)
XLOC_008390 NA non-coding downstream 326472 15778988 ~ 15782552 (+)
XLOC_008393 NA non-coding downstream 534538 15987054 ~ 16018789 (+)
XLOC_008394 BX511308.1 non-coding downstream 583353 16035869 ~ 16045504 (+)
XLOC_008398 CR847990.1 non-coding downstream 1066451 16518967 ~ 16519083 (+)

Expression


Co-expression Network