XLOC_008385 (zgc:174895)


Basic Information

Item Value
gene id XLOC_008385
gene name zgc:174895
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 15456536 ~ 15460133 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016794
TTAACACAAAGACAACGGAGCGCATTAAGAGCAAtgttatgagttattaaactattggGTAATCACGTTACCGTTACATTTGTCATCATTAGGTAGGCTATCATTTTAGATCATCCGTTTAAAAcagctttaagatgacaaaacacCACAAACTGAAGATTTTCGCTATTATTCTGTACACGAATCCTATTCACATTATTCACTGTTGGTGGAAAAGGAAAGCTGCATGTATTCCGCTGAGTAAACAAACACTAAACAGTGTGGGTCTGGTCTGACCCAATGGCTAAGCGATTGCTCTGGGAGAGACGTGAAAACGCCCACTTCAGACTTGTTGAACTCGACACCAAATTACATTCCGTTACTGGAGCGAGTTTGCAGAAGTCTATAGAGCTCTTGTCAGAATGGATGTTTTAGCAGTTCCCCCAAAAAGAGAAGAGGGCTGGTACTTGTCTCTTATGGCACCAAACACAAAAGGACCAAAGTTTGCATGGCTTGATCCATCAAGACTCTATTGCAATTCCCAGGCACTGTCAGATTGTGTAAAAGATCTTCTCAAACCATTCCAGAATGAGACCATTGACCTGGTGGCTGGAATAGATGCCATGGGCTTCATCCTCGGGTCAGCTGTAGCCACAACATTGGGAAAAGGATTTCTGGCTATTCGTAAAGCAGGACACTTATGTGTTGAAACTCACACTCAGGACTACAGTGACTATTCTGGACGAGAGAAAGTCATGGAAGTGCGTGTTGATGTGTTAAAGCCAGGCTTACGGGTTCTTTTAGTAGACCAGTGGATCGAGACGGGAGGAACTATGAGAGCTGCTATCAAACTGGTGGAGAATCAAGGAGCTACTGTTGTAGGTATTGCTGCTGTGGCCATTGAAAACAGTGAAGGAGGAAAATGGCTGAAGGAAAACTATAAATATTCCCACTGCATTCCGAAAGAGCTGCAATCTCAAATAGACAGTCAATATCTGGAGTTCTTCAAGAACTTCAGTGTTTAAAGGCATGACAATCAGGTACATATTCAAGTGGAATGTAATATTTGATTTACATTTCGCTTTGACAGGATTTAAACATTGCCAATAAATCCTCACTGTAAAACATGTATACAGCACTGATTTTATATTGCTGGTATTAAATGTAGAAAGTGCCATATAAAtcgaaatataatattttaatacacatctatgttttgtttctatttctataattataataatgataatatagatgggttttacatttacatgacaTGTCCAGATGTGTTACATATACACATTCATATGAGATAGACAAAATCTAAAATTGAGATTTAAGGTTACCccaattaaaaatagttttcaaatgtttttactTCACATGACAGTATATTTCACTTAAGAATTTAATAACTGTACATGTAATATTGCTGCAAATGATTCAGCTCAAACGTAGTGACATGCAATTGTGCACCATGCCATTCTAAACTTGATATTATATCATATTGGAAATAAACCAATTTGTGTATGGTTGTTACACAAAAATACCAATAGAGGACGCTATCACACTGTAACTGAGATTTCTAACTTGAAACCGGTAAATTTATCAGTGGTTtaatcttttaatcaaacaacatTAATAcagtaataacattaaaaaaggcGTATTTCACTTTACGTGAgaggtttttaaataaataaatggctcattaaaaaaagaaaagcattttatttataataaaattgcTGGTCACAGAAAACTACCATCTGTATGTAAGCCCTAATACTTATAAAGTTTTACAGCAAGATGAAGCTATATAAAGGAATTCCTATACAACTTCCATTTTAATAAACAGCACTTTTGATATA
>TCONS_00016795
TAGGCTATCATTTTAGATCATCCGTTTAAAAcagctttaagatgacaaaacacCACAAACTGAAGATTTTCGCTATTATTCTGTACACGAATCCTATTCACATTATTCACTGTTGGTGGAAAAGGAAAGCTGCATGTATTCCGCTGAGTAAACAAACACTAAACAGTGTGGGTCTGGTCTGACCCAATGGCTAAGCGATTGCTCTGGGAGAGACGTGAAAACGCCCACTTCAGACTTGTTGAACTCGACACCAAATTACATTCCGTTACTGGAGCGAGTTTGCAGAAGTCTATAGAGCTCTTGTCAGAATGGATGTTTTAGCAGTTCCCCCAAAAAGAGAAGAGGGCTGGTACTTGTCTCTTATGGCACCAAACACAAAAGGACCAAAGTTTGCATGGCTTGATCCATCAAGACTCTATTGCAATTCCCAGAATGAGACCATTGACCTGGTGGCTGGAATAGATGCCATGGGCTTCATCCTCGGGTCAGCTGTAGCCACAACATTGGGAAAAGGATTTCTGGCTATTCGTAAAGCAGGACACTTATGTGTTGAAACTCACACTCAGGACTACAGTGACTATTCTGGACGAGAGAAAGTCATGGAAGTGCGTGTTGATGTGTTAAAGCCAGGCTTACGGGTTCTTTTAGTAGACCAGTGGATCGAGACGGGAGGAACTATGAGAGCTGCTATCAAACTGGTGGAGAATCAAGGAGCTACTGTTGTAGGTATTGCTGCTGTGGCCATTGAAAACAGTGAAGGAGGAAAATGGCTGAAGGAAAACTATAAATATTCCCACTGCATTCCGAAAGAGCTGCAATCTCAAATAGACAGTCAATATCTGGAGTTCTTCAAGAACTTCAGTGTTTAAAGGCATGACAATCAGGTACATATTCAAGTGGAATGTAATATTTGAT
>TCONS_00016796
GCAGAAGTCTATAGAGCTCTTGTCAGAATGGATGTTTTAGCAGTTCCCCCAAAAAGAGAAGAGGGCTGGTACTTGTCTCTTATGGCACCAAACACAAAAGGACCAAAGTTTGCATGGCTTGATCCATCAAGACTCTATTGCAATTCCCAGGCACTGTCAGATTGTGTAAAAGATCTTCTCAAACCATTCCAGAATGAGACCATTGACCTGGTGGCTGGAATAGATGCCATGGGCTTCATCCTCGGGTCAGCTGTAGCCACAACATTGGGAAAAGGATTTCTGGCTATTCGTAAAGCAGGACACTTATGTGTTGAAACTCACACTCAGGACTACAGTGACTATTCTGGACGAGAGAAAGTCATGGAAGTGCGTGTTGATGTGTTAAAGCCAGTAGACCAGTGGATCGAGACGGGAGGAACTATGAGAGCTGCTATCAAACTGGTGGAGAATCAAGGAGCTACTGTTGTAGGTATTGCTGCTGTGGCCATTGAAAACAGTGAAGGAGGAAAATGGCTGAAGGAAAACTATAAATATTCCCACTGCATTCCGAAAGAGCTGCAATCTCAAATAGACAGTCAATATCTGGAGTTCTTCAAGAACTTCAGTGTTTAAAGGCATGACAATCAGGTACATATTCAAGTGGAATGTAATATTTGATTTACATTTCGCTTTGACAGGATTTAAACATTGCCAATAAATCCTCACTGTAAAACATGTATACAGCACTGATTTTATATTGCTGGTATTAAATGTAGAAAGTGCCATATAAAtcgaaatataatattttaatacacatctatgttttgtttctatttctataattataataatgataatatagatgggttttacatttacatgacaTGTCCAGATGTGTTACATATACACATTCATATGAGATAGACAAAATCTAAAATTGAGATTTAAGGTTACCccaattaaaaatagttttcaaatgtttttactTCACATGACAGTATATTT

Function

symbol description
zgc:174895 Predicted to enable adenine phosphoribosyltransferase activity. Predicted to act upstream of or within nucleoside metabolic process.

GO:

id name namespace
GO:0009116 nucleoside metabolic process biological_process
GO:0005575 cellular_component cellular_component
GO:0003999 adenine phosphoribosyltransferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070928-41 Predicted to enable adenine phosphoribosyltransferase activity. Predicted to act upstream of or within nucleoside metabolic process.

Ensembl:

ensembl_id ENSDARG00000079416

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016794 False 1850 mRNA 0.36 5 15456536 15460133
TCONS_00016795 False 915 mRNA 0.43 5 15456629 15459333
TCONS_00016796 True 984 mRNA 0.38 5 15456910 15459659

Neighbor

gene id symbol gene type direction distance location
XLOC_008384 NA coding upstream 4020 15450803 ~ 15452516 (+)
XLOC_008383 zgc:92630 coding upstream 19006 15415623 ~ 15437530 (+)
XLOC_008382 dhrs11b coding upstream 48423 15403560 ~ 15408113 (+)
XLOC_008381 ca4b coding upstream 54619 15390882 ~ 15401917 (+)
XLOC_008380 si:ch211-105f12.2 coding upstream 74657 15375607 ~ 15381879 (+)
XLOC_008386 nek8 coding downstream 19309 15479442 ~ 15514013 (+)
XLOC_008387 traf4a coding downstream 56479 15516612 ~ 15593263 (+)
XLOC_008388 NA coding downstream 169373 15629506 ~ 15665686 (+)
XLOC_008389 si:ch211-33e4.3 coding downstream 311285 15771418 ~ 15775182 (+)
XLOC_008390 NA coding downstream 318855 15778988 ~ 15782552 (+)
XLOC_008463 BX663520.1 misc downstream 5792058 21252191 ~ 21252282 (+)
XLOC_008379 NA non-coding upstream 105079 15347642 ~ 15351457 (+)
XLOC_008368 NA non-coding upstream 1206607 14249389 ~ 14249929 (+)
XLOC_008363 BX927244.2 non-coding upstream 1403070 14045121 ~ 14053466 (+)
XLOC_008361 CABZ01056919.1 non-coding upstream 1498686 13957722 ~ 13957850 (+)
XLOC_008393 NA non-coding downstream 526921 15987054 ~ 16018789 (+)
XLOC_008394 BX511308.1 non-coding downstream 575736 16035869 ~ 16045504 (+)
XLOC_008398 CR847990.1 non-coding downstream 1058834 16518967 ~ 16519083 (+)

Expression


Co-expression Network