CI01000026_10200749_10202405


Basic Information

Item Value
gene id CI01000026_10200749_10202405
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10198593 ~ 10202514 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_10200749_10202405.mRNA
CTATAAAAACATGGATGAGATGAAAGGATTCAGTGGTCATCAATCCTTAGAGAACAGAGCATCTTCATAACAGAGGTCGTTCTGTCCAGCACTACATGTCACAGAACACGTTATGAAAGGAAAACTAACATGCCCTTAATACGACAGTGGGACTTTGTCAAAAATTAAAAAAGTAAAAATATTTTTCTTTTTAGCAATACAGTTACTTAAAATTTTGCAGAAAAGTGTGCATAAGTGTTTAAAAGACAAAAAGCAAAAGTAAGCTCAGGAAGTCACTCCCTGAAAGTGCACCAAATTCCATTCAGTGGAAAAGACATTGCCTGTGTGGATACGTGGATGGTCATCTCCACGGGAGGAAGGGAGTGTGCAACACACGGGGCAGGGGTGGGAAAACTCCAGGGAACATCAGAGAAGAACATCTAAGACACACACACAGTTGAACGTTTAACCTCTCTAGTCATGTATAGATTGCCAGAATTAGCGAGAGAGAAGGGTGGAGAACAAGTCAAGGGTCAGAGGGGGTCCATATGCTTCACAAATAAAGCATAAGTGATCCAGCAGTACTCCATTGTCTTAGGGAGCGATTGTGTTTCTTTTAAAGTAGGAGAGCAGAAAATCTTAACTGTTATTCATAGGAACATTGATGTCACTATTACTAAGTTACGCAGTTATCGTAATGTAGATCAAAGAGGCAAACTACAAAAATTATCTTGACAGGACAAATAAAGTTATATTTGATAAGCATTCAATAATCACTGAAATTGAATAGCAAAAATCTTAGAAATCAACAAGCAGACTTTAAGAGACCGTAAACTCATACTAATGCTTACACGTACGCTTTTACTCATGCATGTAGCAGCAGTCTGACCAGAATGCTTTAGCACGTTCGGTGTGAGATTATAATTAACCTCATGTCTGCAAGTAAGGCTGTCTGCTTGTCACTTGCTTTCAGGCACGGTCAGACTCTCAGTGAAATCAATCAACTCTCTGTTCAACACTGCACAGATGCCCAACACAAACTCTGACAGAAAACACAACACATCAGTGCTCTTTCACCTTCAGTTTGGTCATTTGTATTTTGTATGTGCTACATACATGCATATAATGTTTAAGGCTCATAACAGGGGCATTTTTCAACTAGAAAGCTAGACTAGACTAGCTTGATTAAAAAGCTTAAAGGATTAGTTCACTTTCAAATATAAATGACCCCAAGCTTTACTCACCCTCAAGCCATCCTAGGTGTATATGACTTTCTTCTTTCTGATAAACACAATCGGGGAAATATGAATAAATATCCTGACGTAGTAGAATTCATGAGTAGAATACGGAAAGCGGTCTGGCGGAAGCTAGATATTTTACTTCATAACTTGTTAAATCTGGATTTTTTTTTTTTTTACATTAATGCATCGCTTCGCTTCAGAAGGCCTTTATTAACCCCCTGGAGCCGTGTGGAGTATGTTGATGGATGGAGACACTTTTTCTGCTCATACTCGTTTGGTAACACTTACTGCCATTATAAAGCTCAGATGGTCAGGATATTTATTAATATTTCTCTGATTGTGCTCATCAGAAAGAATAAAGTCATTTACACCTATGGCTTGAGGGTGAGTAAAGCTTGGGCTAATTTTCATTTGAAAGTGAACTAATCCTTTAAGTGTCCTGCATCAGGAATCTCATGTCATACTGAAACCCATACATCTCTCTCTCATAGATTTTTATAGATTGTTCACTCTCAACATGAAAGCAGATTCCAGTCTGTCATCGAGTAAGACAATGAATGTCCCATTAGCCCATATTGGGTGACATTAAGTGGGTACTTTATCACTTCCTACCATATTTCAAGCAAATATATGTGTCGGCTGTCAAGAAATCTAAAACTCCATTCAAAGAACATTAGAAGTGTTGACAGAAAATTACATAATGTGAAACAATTGTAAGATTTACAATTTTGAGTATTGAGTGTCGGTTTTTATATTCATTTTTCCTAAAATTTACCAAAAATCCATTTAAGCGGAGTAAAAACTGAATTTTTAAATACTGGAAAACAATTAATAACTCTGTAACAGCTGACTGTTAATGACACCAAAAAGCAAAGATGTTTATTTCATAGTAAACTTTCAGAATAACTTTCTGATTCCTAAATTCTTTCATCACCCATGAACTTCTATAAGTGGAAGAGTTCATCTGTGTGCAGTGCTGAATGTGGCTGTCTTGCCAGAATTTGTACCACAATGACTGCTGTGAGGCTCAATCTCCAGAGGCTCGATCACAAACTGTGCACGCGCTACCGAAACTACCGCTCGGATCATGTCTGATTTGCGCGCGCCTCCCCGCGTGCAGCAAAAAACACGACTGTTTCTGAACGTGTCTGAACTGTGTGAGTTTGAGGTTGCATGCTGAAGCAAATCAAATATTTAAGAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_10200749_10202405.mRNA True 2424 mRNA 0.38 2 10198593 10202514

Neighbor

gene id symbol gene type direction distance location
CI01000026_10136110_10149386 BRD7 coding upstream 49127 10135996 ~ 10149466 (+)
CI01000026_10124232_10124468 NA coding upstream 72758 10123916 ~ 10125835 (+)
CI01000026_09915483_09917692 NA coding upstream 280674 9915445 ~ 9917919 (+)
CI01000026_09900193_09906874 SALL1A, SALL1 coding upstream 291356 9900193 ~ 9907237 (+)
CI01000026_09666763_09669325 NA coding upstream 528891 9666680 ~ 9669702 (+)
CI01000026_10265012_10268157 NA coding downstream 62431 10264945 ~ 10268548 (+)
CI01000026_10315650_10317985 NA coding downstream 112565 10315079 ~ 10317990 (+)
CI01000026_10351923_10354175 CEBPG coding downstream 148889 10351403 ~ 10356695 (+)
CI01000026_10453245_10454111 NA coding downstream 250611 10453125 ~ 10454176 (+)
CI01000026_10455059_10456945 CNEP1R1, CNEP1R1.L, TM188 coding downstream 252545 10455059 ~ 10457563 (+)
G133188 NA non-coding upstream 46392 10102019 ~ 10152201 (+)
G133153 NA non-coding upstream 129720 10068576 ~ 10068873 (+)
G132977 NA non-coding upstream 168082 10030239 ~ 10030511 (+)
G132974 NA non-coding upstream 176316 10022076 ~ 10022277 (+)
G132949 NA non-coding upstream 209930 9988139 ~ 9988663 (+)
G133281 NA non-coding downstream 67553 10270067 ~ 10270293 (+)
G133285 NA non-coding downstream 75051 10277565 ~ 10277783 (+)
G133286 NA non-coding downstream 77209 10279723 ~ 10279929 (+)
G133303 NA non-coding downstream 96662 10299176 ~ 10299384 (+)
G133310 NA non-coding downstream 103876 10306390 ~ 10306607 (+)
G133192 NA other upstream 36632 10159819 ~ 10161961 (+)
G132667 NA other upstream 629433 9568739 ~ 9569160 (+)
G131077 NA other upstream 1691806 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 1899179 8297857 ~ 8307629 (+)
G130967 NA other upstream 2009520 8188374 ~ 8189073 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 868254 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 1042419 11241496 ~ 11246204 (+)
G133542 NA other downstream 1273603 11476117 ~ 11477544 (+)

Expression


Co-expression Network