XLOC_008394 (BX511308.1)


Basic Information

Item Value
gene id XLOC_008394
gene name BX511308.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 16035869 ~ 16045504 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016805
GCAAAACAAACACACGGCTCTCAAAGAAACACACTCCAGTGACTTTCAATTAGCCTCATTAGACTCATTTGAGGGAAGTTAATTAAAACATTATCTCAGCAGCCCGCTTATTGCTTGATTTCTCAAGTGTtcgagggatagttcacccaaaacttaaaaatGTGCCATCCAAGATCTAGttggctttttttcttttcatttgaacATTAACAAATTTGTTAGCTTGAAATTGTGAGTTATTTAAAGCGAGTCAATGGCTGAGagtcaaacaaacatatacaggcaaaactaaataattaaagatAACGATGATAAGACTAAGGCAAGAACATCAAGGTAATTACATCAAGCTTGGACTCTGCCTTTTTGTCCCTTTGTCTCCACGGTCCTCTGCTCCTCCGCTAATGAATTCATCTGCACATCTCCGTTCCTCAGCCAGCACATTAACCCCGACCACTGGAGCCATCCTTATGGAAAAACGGTCCCTCTTCCAAGCATGGAGAGCCACATCGGATTGACCTTTCCACCTCGGCCCCCTTCTCGACCCCTTGCTCTGAGTCTCGGTCCATCTGCATTTCAACACAGCGCCAGCGCATACCCAACCTCCTCTTGCCCCGCGATGACACATTATTGTCAACAGCCCATGGAGGTCTCCAAACCACCCTCCTGGGTGCCCACATGCCCTCATAGCGTTTACTACATTCAGGAATGAAGTGGTGGAAACGCTTGAACGATTTCTGTGTTGGAAAGAAATTGAGAGTCATTGACTTGTTCACTCCTCTGACTGATCAGCCATTACTACTGTAGCTCTTCCCAAACCCCCTGCTGAGACGCTCTATGACAATACAGAGCTAATGAGGAGCTGTTTACAATGGGTATTAACATGCATTTCTAATGATCTGATCACAAGCTGAGATGGATTACCGTTTCTATCAGGTATTAATATGCATTCCAATAGGTGTCTTTTGGCCACCACCATATTTTGGAGTGATCAGTCCATCTAATATTGTCATGTTCTACATCAGTGCTTTGTGCTTGAGAAAAGGTTGAGGAAGGTAAGTATGATTTGAAACACAACCCAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097404

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016805 True 1082 lncRNA 0.43 2 16035869 16045504

Neighbor

gene id symbol gene type direction distance location
XLOC_008393 NA coding upstream 17080 15987054 ~ 16018789 (+)
XLOC_008392 dusp14 coding upstream 158037 15856178 ~ 15877832 (+)
XLOC_008391 tada2a coding upstream 216271 15786160 ~ 15819598 (+)
XLOC_008390 NA coding upstream 253317 15778988 ~ 15782552 (+)
XLOC_008389 si:ch211-33e4.3 coding upstream 260687 15771418 ~ 15775182 (+)
XLOC_008395 mrm3a coding downstream 139614 16185118 ~ 16192208 (+)
XLOC_008396 p2rx8 coding downstream 297569 16343073 ~ 16371103 (+)
XLOC_008397 flot2b coding downstream 341584 16387088 ~ 16407983 (+)
XLOC_008398 CR847990.1 coding downstream 473463 16518967 ~ 16519083 (+)
XLOC_008399 galnt17 coding downstream 476281 16521785 ~ 16546472 (+)
XLOC_008463 BX663520.1 misc downstream 5206687 21252191 ~ 21252282 (+)
XLOC_008388 NA non-coding upstream 370183 15629506 ~ 15665686 (+)
XLOC_008384 NA non-coding upstream 583353 15450803 ~ 15452516 (+)
XLOC_008379 NA non-coding upstream 684412 15347642 ~ 15351457 (+)
XLOC_008400 BX649487.2 non-coding downstream 784258 16829762 ~ 16829876 (+)
XLOC_008403 BX571762.2 non-coding downstream 869227 16914731 ~ 16920987 (+)
XLOC_008411 dre-mir-21-2 non-coding downstream 1328285 17373789 ~ 17373915 (+)
XLOC_008412 CR848791.3 non-coding downstream 1330863 17376367 ~ 17378063 (+)

Expression


Co-expression Network