XLOC_000084


Basic Information

Item Value
gene id XLOC_000084
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 7512529 ~ 7512762 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003025
GAGGCTGTTAGCATTGCTCTCTGATTAGGAAGGCTAAGCAGTCTCGAGAGCTGGGAGCGAGAAAAGCGCCGAGtcctatttgttgttgttgttttgggggGCAGAAGTTGTTAATATGGGAGGTATGGTAGCTACACAATCTATTTTCTAGCAGTTAGCAGCTCGGCTATAGTGGCAGATTGACGGGGAGAAAGAGTGAAAGACACTTCAAAAGGGAAGGAGGATCCCAGTCTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003025 True 234 lncRNA 0.48 1 7512529 7512762

Neighbor

gene id symbol gene type direction distance location
XLOC_000083 ERBB4 coding upstream 63734 7189856 ~ 7448795 (+)
XLOC_000082 CABZ01075319.1 coding upstream 396615 7092273 ~ 7115914 (+)
XLOC_000081 CU929161.1 coding upstream 448586 7063837 ~ 7063943 (+)
XLOC_000080 NA coding upstream 522502 6956913 ~ 6990027 (+)
XLOC_000079 erbb4a coding upstream 587122 6817292 ~ 6925407 (+)
XLOC_000085 lancl1 coding downstream 4687 7517449 ~ 7554463 (+)
XLOC_000086 pcnp coding downstream 44203 7556965 ~ 7561222 (+)
XLOC_000087 NA coding downstream 159359 7672121 ~ 7674229 (+)
XLOC_000088 en1b coding downstream 166566 7679328 ~ 7683372 (+)
XLOC_000089 CR855320.1 coding downstream 443268 7956030 ~ 7961696 (+)
XLOC_000078 CU302223.1 non-coding upstream 724725 6787690 ~ 6787804 (+)
XLOC_000077 NA non-coding upstream 751599 6759183 ~ 6760930 (+)
XLOC_000097 NA non-coding downstream 1061015 8573777 ~ 8575057 (+)
XLOC_000098 AL928650.2 non-coding downstream 1062545 8575307 ~ 8577274 (+)
XLOC_000100 NA non-coding downstream 1074468 8587230 ~ 8590636 (+)
XLOC_000105 NA non-coding downstream 1438112 8950874 ~ 8965939 (+)

Expression


Co-expression Network