XLOC_008402 (ypel2b)


Basic Information

Item Value
gene id XLOC_008402
gene name ypel2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 16897554 ~ 16914645 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016816
GCGAGCGAAGCGGGAGAGGGATTTTGTCGTGACAAGAATGCAGAAGCAAAGTTTGCCGTGAAAACTGATTTACTTTAACAGAGGAGCGCGTGACACCATCTCGCAGCTTCATTTTCTTCTTTTCAAAGGTGTATACCTCCCACCCCGCCCCACCACGGCCCTCACCTGTGTGTTGCGGTGCTTCCCTTGTGAGCCGACCTGGGCCGGCAGCCCGTTCTTGCACCGCCCGCCGACCCGGCCCATGGTCACCATGACGCGCTCCAAAACCTTCCAGGCATATCTGCCCAACTGCCACCGCACCTACAGCTGCATCCACTGCAGAGCACACCTGGCCAACCATGACGAGCTCATCTCCAAGtCCTTTCAAGGAAGTCAGGGCAGAGCATATCTGTTCAACTCTGTGGTGAATGTGGGATGTGGTCCCGCAGAGGAGAGGGTTTTGCTTACAGGGCTCCATGCTGTGGCTGATATCTACTGCGAAAACTGCAAAACTACACTGGGCTGGAAATATGAACATGCCTTTGAGAGCAGCCAGAAGTACAAGGAGGGCAAGTTCATTATCGAGCTCGCCCACATGATCAAGGACAATGGCTGGGACTGAGCGAGCGTCCTGGAGAGAGCAAACCTATGACGGGTGGATGGTGAATGTGTGGGTGAATGACTGACTTTGGTTTGCCATTACCCTCTTAAACCTTCTTTTACCCTCCATCtcctgctgacacacacacacacacacacacacacacaccccttgcCTGACCAGAAACAGGAAAAGGGGACGCCCTAAGGGGCTTTGTGTGTCTGG
>TCONS_00016817
ATGGTCACCATGACGCGCTCCAAAACCTTCCAGGCATATCTGCCCAACTGCCACCGCACCTACAGCTGCATCCACTGCAGAGCACACCTGGCCAACCATGACGAGCTCATCTCCAAGtCCTTTCAAGGAAGTCAGGGCAGAGCATATCTGTTCAACTCTGTGGTGAATGTGGGATGTGGTCCCGCAGAGGAGAGGGTTTTGCTTACAGGGCTCCATGCTGTGGCTGATATCTACTGCGAAAACTGCAAAACTACACTGGGCTGGAAATATGAACATGCCTTTGAGAGCAGCCAGAAGTACAAGGAGGGCAAGTTCATTATCGAGCTCGCCCACATGATCAAGGACAATGGCTGGGACTGA

Function

symbol description
ypel2b Predicted to enable metal ion binding activity. Orthologous to human YPEL2 (yippee like 2).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-110419-2 Predicted to enable metal ion binding activity. Orthologous to human YPEL2 (yippee like 2).

Ensembl:

ensembl_id ENSDARG00000087258

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016816 False 805 mRNA 0.54 5 16897554 16914645
TCONS_00016817 True 360 mRNA 0.52 4 16908085 16914441

Neighbor

gene id symbol gene type direction distance location
XLOC_008401 gdpd1 coding upstream 2679 16886196 ~ 16894875 (+)
XLOC_008400 BX649487.2 coding upstream 67678 16829762 ~ 16829876 (+)
XLOC_008399 galnt17 coding upstream 351082 16521785 ~ 16546472 (+)
XLOC_008398 CR847990.1 coding upstream 378471 16518967 ~ 16519083 (+)
XLOC_008397 flot2b coding upstream 489571 16387088 ~ 16407983 (+)
XLOC_008403 BX571762.2 coding downstream 86 16914731 ~ 16920987 (+)
XLOC_008404 plin2 coding downstream 115828 17030473 ~ 17048822 (+)
XLOC_008405 clptm1 coding downstream 159540 17074185 ~ 17095655 (+)
XLOC_008406 relb coding downstream 185767 17100412 ~ 17125217 (+)
XLOC_008407 si:ch73-223p23.2 coding downstream 336546 17251191 ~ 17255307 (+)
XLOC_008463 BX663520.1 misc downstream 4337546 21252191 ~ 21252282 (+)
XLOC_008394 BX511308.1 non-coding upstream 852050 16035869 ~ 16045504 (+)
XLOC_008393 NA non-coding upstream 878765 15987054 ~ 16018789 (+)
XLOC_008390 NA non-coding upstream 1115002 15778988 ~ 15782552 (+)
XLOC_008411 dre-mir-21-2 non-coding downstream 459144 17373789 ~ 17373915 (+)
XLOC_008412 CR848791.3 non-coding downstream 461722 17376367 ~ 17378063 (+)
XLOC_008419 NA non-coding downstream 971553 17886198 ~ 17936128 (+)
XLOC_008420 CR385077.2 non-coding downstream 1172057 18086702 ~ 18086816 (+)

Expression


Co-expression Network