CI01000026_12192269_12200366


Basic Information

Item Value
gene id CI01000026_12192269_12200366
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 12191652 ~ 12200734 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_12192269_12200366.mRNA
CTATAAAAGTCCAGATTTTGTTAGAAAGGCTGTAAAACCCAAAGCAACATGGCTGACAGATATTTAAATAGTACTGAGATCTGTTGTGTAAATCTTGTAAGAATTACCCCTAGACTTAAACTGGTGGAATATGATATATGCGTATATAACGTACATAAAACAAAGGAAATGATTGCAGATATACTGAGATATCATAGTACTTTTATTGGGGAAATTATAGTTTTTTGTAAAACAACAATTTTAACAGCATTGTAAATAAGCAGCATTGGTGGTGTGTACAGTATATGACAACACTTTATCAAATGAAATACAACAATGCAGCTTTGTAAAGAGTGCTAATGTGAAGATTTAGCTTTACAATACATCTACATAATGTCTTGTAGCTCCGATATAAAACTTGATGTAATATTTCCAACATTATATTGGTCAGATTTTTATTTTCTTCCTTTTCCAGTTGGATCGTGAAACAAACAACAACAACAACAACAACAACAAAAATACATGTTTTTTGGTTGCTAGCTATAACATTTTGCAGATAATCTAATGAATTTTTATCCATTGTTATTCTCTGCATACTTACAGATAGCAAGCCATTGATGTGAGCGGTTCAACCACGGATGTTTAATGCAGGAATGCTTGCATTTATTTCATTCTTGGATCTGCAAGGCCATAGAGACAGTGTCCTTCACTTCAGCCTGCTACAACAACAACAAAAAGAATACAAATATTTTAAAAAGAAGAAGAAGAAGAAAAAAACGGTCAAATGGCAATCGAACAAAGCATGCTGCAGCAGATGGTTTACTCTCATGTGCTCACTTATTTGCGTGTTACTGCATTTTCCTCTGCTGTCCATCACCATTCTACAGTATCGAGTCTTTGACATATCTTTGCTGGAGTTTTTTAGAGTGTTAAATGTTATAAGTAAATATGGAACCACGTATAGTATTGAGAAACAACAAAAAGTTTAATCATGCTACCATTCATAATCATTATTAGTAATATATGATGGCGAGTAAATTGGTTTTCTCAGCTTCCACTGAGGAATTTGTCTTTATCATGGCACGGAGTGGAATGTGATAAGTCAATAAGAAAATGCCATTGATAACATGCAAAAATACTTTTTTTTCCCTTCTGTCTTGGGTTTCTGAATTACTCTTAGTGCTCACCCTTTGCCCCCTAAATCTCTGTTCGAATTGAAAAAAGCATGTATTTGCGCATCTCTAAGACTCTCTTCTCCCTCCCGCTGTGTTGGGTTGACCTGGGGCTTGGCTGTCTTGCCTTGGCCTTGAGAGGACTGGGACTGTGTTTAAGTAGAGGGAGCGGCTGAGCGAGGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_12192269_12200366.mRNA True 1336 mRNA 0.36 2 12191652 12200734

Neighbor

gene id symbol gene type direction distance location
CI01000026_12094316_12125431 NA coding upstream 65388 12094316 ~ 12126264 (+)
CI01000026_12074163_12076475 MNX1 coding upstream 114112 12073813 ~ 12077540 (+)
CI01000026_11862091_11976290 PTPRN2 coding upstream 215362 11862091 ~ 11976290 (+)
CI01000026_11809092_11810238 NA coding upstream 381241 11808462 ~ 11810411 (+)
CI01000026_11792044_11807684 NCAPG2 coding upstream 383378 11792044 ~ 11808274 (+)
CI01000026_12203244_12209526 SHH, SHHA coding downstream 624 12201358 ~ 12209698 (+)
CI01000026_12425699_12438163 NA coding downstream 223345 12424079 ~ 12438621 (+)
CI01000026_12486292_12534245 SCRIB coding downstream 285152 12485886 ~ 12534327 (+)
CI01000026_12551009_12554565 NA coding downstream 350275 12551009 ~ 12554565 (+)
CI01000026_12558237_12560933 RGS9BP coding downstream 357503 12558237 ~ 12561618 (+)
G134201 NA non-coding upstream 40877 12150519 ~ 12150775 (+)
G134197 NA non-coding upstream 47865 12143509 ~ 12143787 (+)
G134120 NA non-coding upstream 159246 12005870 ~ 12032406 (+)
G134145 NA non-coding upstream 278220 11912221 ~ 11913432 (+)
G134141 NA non-coding upstream 300050 11861568 ~ 11891602 (+)
G134238 NA non-coding downstream 59213 12259947 ~ 12260177 (+)
G134179 NA non-coding downstream 62961 12263695 ~ 12303098 (+)
G134182 NA non-coding downstream 126200 12326934 ~ 12329825 (+)
G134256 NA non-coding downstream 172844 12373578 ~ 12374238 (+)
G134258 NA non-coding downstream 174700 12375434 ~ 12375667 (+)
G133542 NA other upstream 714745 11476117 ~ 11477544 (+)
CI01000026_11241496_11246081 NA other upstream 936579 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 1112572 11075784 ~ 11079080 (+)
G133192 NA other upstream 2029691 10159819 ~ 10161961 (+)
G132667 NA other upstream 2622492 9568739 ~ 9569160 (+)

Expression


Co-expression Network