CI01000026_12706512_12707086


Basic Information

Item Value
gene id CI01000026_12706512_12707086
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 12705293 ~ 12707152 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_12706512_12707086.mRNA
ACATAAAAGGCGCAGCGCCAGCTCTCATACAAATCAGCACGGACAGCAGAGTCAGACTGGTCAACGTGAGTGGCCCTGCATGTTCAGGCAGTGGCAGTGTACGTTCCAGCAGTGCATCCGAGCAGAAGCGATGCAGCAGTTACAGAGAATTCCAGCTTCTTTCATCTCACCAGAGATAAAAAGCTTGTGTATAGCACAACTACTGAATACTCTTCATTCATTATTCTGGTGATTCACTCAGCAAGCACCTGAGACTGATATAGGAGTGGTGACAAATTTGGGAGGGAACGGCAACTAAGATCACAAATGCTTTGTCACAATATTATTTTGAAGAAGGCAATAGAACATGCTACAGGAAAACAGACGTTTTTTAAGTCCGTGCCATATTATAATATGTTACCTCCAGCTCTTTCTTGGTGTAAGTGAACAGACATTGACGTTAGGGTCACTCCACTCATATAAGAAACCGCTAAATTATGATGGAGCATTATAATATTAGTCCTGCTGGGGAAGAGGAAAGCAGCACATCTTAATAACTAGGTTACCAAAGACTGGAAAGCAGAATGCATTCAATGTAATCGCACTGTAATGTAATGTAACGTAACTGCACCAGGTGAAAATACAAAATTTAGAATTCAGAGACTATAAATCTGTGTAGGAGCATTAGATAATATCATATACGTATAACAATGTACTATACAGTGTTGTAACCAGCACTCAAAGACTTTTTTCACCAAATATTTTTTAGTGATTTCTAGAAAAAGATTTCAGAGAATGCATTCACAAAGAACTATTTATATTATTAGAAAATGTTGTTATATACAATACTTCCAAATCTATGCCTTTTCCAGGCCTGAAAATCACAGTTTTAAAGACCCTGACATTTCAAGGTTTCCATCACTGCAGGAACCTTTACAGAGAAAACGACTGGAGCTTAAAAAAAAACACAAAAACTAACTTGGTGAAGAAAAAAATAATGCTGACAGTGTCTGTATACGCATCGCAAAGCTGCTTCAGTTATATTTCTAAGATAAATCCACCTACATATACGTACCTATGATAAATCACATTCCAATACTTAAAAACAAACTGACTTCACATTGACTATATGAGTGAATCTTGAGGAAAGGTATCTTTATGTTGCTAGTAACACTTTCAATTACCTCTCACTTTCAAGTGAGAGGTAATTAGGCTCTTTACAGAGTACTGGGGGCATCTGATGTCTCATAACATCCCCACTACAGCCTTACGTGCTGCTTTAAACCTCTCACTCCAGAGAGTCAGCATTAAGATCGCTCCATCCGAACTGAAGACCAGTGATGGAGAAGACAGGATTAACACGTGCACCAGTGTGCGCGCTCGCGCGCATTCAGGACCAGTTCGTGTGTACTGTCTGGCTTCATATAGTCTCTATCTGCTTTTTACATTGCCAAATAAACTAGATCCAATGGTTACTGTGGCCGGTTGGTCGCTAAAGGGCAGCGGACGACAGATGAAGAAGCGGATGAGGAGCGATGGAGATGAAGTTCTTTATAGCTTAAATCAGAAGCACACACTCCCTGTTGCTCGGTGCTGGAGTGACTGGACAGTCAGTGTGGAGAGAGAGGCAGCGGAGTGAGGAGGGGACGCAGCCAGAGACGGTGAGCGCTGAGGCGCAGGCGCGTCCTGTCCACCGCTGCTTCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_12706512_12707086.mRNA True 1684 mRNA 0.42 2 12705293 12707152

Neighbor

gene id symbol gene type direction distance location
CI01000026_12653232_12657339 CHPF2 coding upstream 47457 12653072 ~ 12657836 (+)
CI01000026_12582462_12589223 GAREM, GAREM1 coding upstream 115736 12582304 ~ 12589557 (+)
CI01000026_12562467_12570436 DPH2 coding upstream 134519 12562467 ~ 12570774 (+)
CI01000026_12558237_12560933 RGS9BP coding upstream 143675 12558237 ~ 12561618 (+)
CI01000026_12551009_12554565 NA coding upstream 150728 12551009 ~ 12554565 (+)
CI01000026_12867260_12871481 NA coding downstream 160059 12867211 ~ 12871720 (+)
CI01000026_12929788_12932668 HRH3 coding downstream 222487 12929639 ~ 12933391 (+)
CI01000026_12966022_12977066 ORC6 coding downstream 258444 12965596 ~ 12977588 (+)
CI01000026_13019100_13028307 GPT2 coding downstream 310968 13018120 ~ 13029368 (+)
CI01000026_13218786_13290069 PHKB coding downstream 511634 13218786 ~ 13290154 (+)
G134332 NA non-coding upstream 71865 12633109 ~ 12633428 (+)
G134326 NA non-coding upstream 76919 12628018 ~ 12628374 (+)
G134319 NA non-coding upstream 77565 12625829 ~ 12627728 (+)
G134359 NA non-coding upstream 82578 12621919 ~ 12622715 (+)
G134357 NA non-coding upstream 83745 12619441 ~ 12621548 (+)
G134325 NA non-coding downstream 1814 12708966 ~ 12709598 (+)
G134317 NA non-coding downstream 11669 12718821 ~ 12736010 (+)
G134301 NA non-coding downstream 17227 12724379 ~ 12728852 (+)
G134686 NA non-coding downstream 81041 12788193 ~ 12788401 (+)
G134688 NA non-coding downstream 82058 12789210 ~ 12789624 (+)
G133542 NA other upstream 1228386 11476117 ~ 11477544 (+)
CI01000026_11241496_11246081 NA other upstream 1450220 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 1626213 11075784 ~ 11079080 (+)
G133192 NA other upstream 2543332 10159819 ~ 10161961 (+)
G132667 NA other upstream 3136133 9568739 ~ 9569160 (+)

Expression


Co-expression Network