CI01000026_12900826_12904700


Basic Information

Item Value
gene id CI01000026_12900826_12904700
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 12900788 ~ 12905085 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_12900826_12904700.mRNA
ACTTACGAATAACAGTAAAATGCTGCAAATAATTTTTTCTTACGCTTGAAATGCGATTTACACCTTTACAAATCTGCTCTTGCGCATGCAAATTTAATTTACGCTTACAATCTTGTGTACACTTCCACAAATATTACTTTGCGCATGCAATTCTTTATGGCATCATTTTACCTTCATACACATTTCTCCAGAGACTGAAGTGAAAGAGACGGTGTCCAGAAAAGTAGCAAGAGATCAGAAAAAACGAATGCAATATAGTAAAGGAAATACAGATTCAAACAAAACCTGCTACAGATGCGGACAGACAGGTCATCTTGCAAAAGATTAATGTCCCGCACGCTGAATATCATGCAGAAAGTGCAATGGAAGAGATCATTTTGCAAAAATGTGTAAAACAAAGGAAAGCTCAAAACAGACAGTAAAAAGAGTTGAATCAGATGAGAAAAATCAAGAGTTTGCATTTGTTGTAAGAGAACAGAGCAACATGGACAAACTAATATTCTCAGTCGGAGGTGTCAGACTACCCATGTTAGTTGACTCAGGAGCAACAAGCAACATAGTAGATGAAGGAACGTGGGAAATGCTGAAAGGAAAAAAGATCAAGTGCAGTTCTGCTAAATCAGACAAAAAACTGTATGCATACTCATCAAGTGAACCCCTGCCAGTGAAAAGAATTTTCTGGTGTGAGGTCGGAATTGGAAAGCACACCACAAAAGCTGAGTTTACAGTTATTTGCGGGAGAGGGGAGTCACTGCTCGGAAAAGATACAGCAGTTAAATTAGGAGTGCTGAGGATTGGAGCTAATGTCGCAGCGGTGAGTGATGTGATGTCTATGATACGACAGCAAAACCCCAAATTGTTCTGTGGAGTAGGCAAACTAAACACAAAACAAATTAGCCTGCACATAGACAGCACAGTGACTCCAGTTGCACAGCCCCTTAGACGCGTTCCGTTCAATCTAAGAGAGGCTGTTGAGAAAAAAATAAATGAGCTGCTCCACATGGACATTATTGAGAAAGTCAATGGAGCAACCCCTTGGGTAAATCCAGTTGTCATTGTGCCCAAAGCAAACGGGGAAATAAGGATGTGTTTAGATATGAGACAAGCAAACACTGCAATCAGTCGTGGGAGGTTTCCGATTCCCACGGTGGATGAACTGTTGCAAGGAATGAATGGATCAGTTGTTTTCAGCAAACTAGACCTGAAATGCGGGTATCATAAGCTGAAATTGAACCCAGAATCAAGAGTCATCACAACTTTTGCTGTTCATAATGGCATCTATAGGTTCAAAAGACTGGTGTTTGGAGTTTCGTCAGCGAGTGAGCAGTACCAGCATGAAATAGCCACTGTTCTAGCTGGCATCGAAGGAGTAGAGAACATGTCAGATGACATCATCCATGCATCTGACAAAGAGACTCATGAGAAAAGAATGCATGCAGTACTAAAGAGACTGGAAAGCTGCGGCTTGACTCTGAATGTAGAGAAGTGCCAGTTTAACATGGACAAATTGGTGTTTATGGGCATGCTGTTGTCAGAGAAAGGCATAGGCCCAACGGCAGAGAGGGTGAGAGCAGTTGTGGAGGCAAGAGAGCCTGAAAACGCTTCAGAGTTACCAGACATTACAACACCACGCAGTGATCTTGAAGCTCGAGACAAGGATGCAGAGCATAAAGGAAAAGCCAAGATACACACAGACAACAGACGAGGCACTAAGACATCAGACATAAAGTTCACAACAACATTTCACAGCACACCTCACAAGGTCATACACAGAGAAGGTAACAGTGTTGTCGTTCAGTCACCCACTGGAGCAAAGTATGCACGGAACATGACATTTGTCAAGAAGTTTCATTCTGTGGAAACACCAACAGTGAATGGAGAAATGAAATGTGCTCGAGAGCCAAGTTGTGATAAGAAGCAAAAGGGAATCGCAGATGAATGCAAAATGAACCGTGAAACAATTCAGAGAGAGGAACAGATTCCTAAACTGTGCAGGCCTCAGAGACAAATCAAATTGCCTGAAAGGTTTAGAGACTATGTTATTGAGTAACTACTGAAATTCAAAAGTATTAGTTTAAAAAGAAAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_12900826_12904700.mRNA True 2088 mRNA 0.41 2 12900788 12905085

Neighbor

gene id symbol gene type direction distance location
CI01000026_12884442_12887984 ARL8, ARL5B coding downstream 12804 12883771 ~ 12887984 (-)
CI01000026_12792682_12819124 MALRD1 coding downstream 81664 12792682 ~ 12819124 (-)
CI01000026_12728675_12752693 NA coding downstream 148095 12728589 ~ 12752693 (-)
CI01000026_12712643_12726107 NFX1 coding downstream 174681 12712599 ~ 12726107 (-)
CI01000026_12663161_12672818 SMARCD3A, SMARCD3B, SMARCD3 coding downstream 227970 12661264 ~ 12672818 (-)
CI01000026_12934742_12962957 DKFZP468J242, VPS35 coding upstream 29657 12934742 ~ 12962957 (-)
CI01000026_12985635_12997297 NA coding upstream 80277 12985362 ~ 12997297 (-)
CI01000026_13010221_13016325 CLG3H16ORF87, C5H16ORF87 coding upstream 104772 13009857 ~ 13016325 (-)
CI01000026_13033698_13034704 NA coding upstream 128540 13033625 ~ 13035620 (-)
CI01000026_13039331_13039570 NA coding upstream 134186 13039271 ~ 13039570 (-)
G134931 NA non-coding downstream 29049 12867251 ~ 12871739 (-)
G134921 NA non-coding downstream 51008 12849353 ~ 12849780 (-)
G134916 NA non-coding downstream 67356 12833186 ~ 12833432 (-)
G134680 NA non-coding downstream 117795 12782715 ~ 12782993 (-)
G134678 NA non-coding downstream 263990 12636585 ~ 12636798 (-)
G134986 NA non-coding upstream 112783 13017868 ~ 13018078 (-)
G135007 NA non-coding upstream 290182 13195267 ~ 13195982 (-)
CI01000026_13299234_13300178 NA non-coding upstream 395485 13298482 ~ 13300940 (-)
G135043 NA non-coding upstream 399210 13304295 ~ 13304578 (-)
G135053 NA non-coding upstream 420106 13325191 ~ 13325401 (-)
G133802 NA other downstream 1593607 11301915 ~ 11307181 (-)
G133790 NA other downstream 2063183 10834015 ~ 10859589 (-)
CI01000026_10788054_10788652 CD59 other downstream 2110634 10787339 ~ 10789709 (-)
CI01000026_10347872_10351783 CEBPA other downstream 2551831 10347746 ~ 10351783 (-)
G132721 NA other downstream 3350144 9550030 ~ 9550644 (-)
G136110 NA other upstream 1649832 14554917 ~ 14555436 (-)
CI01000026_16756776_16760261 RBPMS2A, RBPMS2B, RBPMS2 other upstream 3851644 16756729 ~ 16761341 (-)
G137667 NA other upstream 3901279 16806364 ~ 16808372 (-)
G137914 NA other upstream 4078166 16983251 ~ 16984352 (-)
G137967 NA other upstream 4163263 17068348 ~ 17069433 (-)

Expression


Co-expression Network