CI01000026_14376741_14381102


Basic Information

Item Value
gene id CI01000026_14376741_14381102
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 14376570 ~ 14382093 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_14376741_14381102.mRNA
AATGTCTAAGAAGTAGTGTTTAGTCAGACTAGCTTGTAAATAGTAGGTGTAGAGGTAAAAATATGTTTTGTCTGGTTTTGTTTTATTCATTACTGAATAAGTGATTCATTACTGGGATGCTTTTACACCCTCAAGATTGTTTTTGGATCATGTTTCAAATCTGCAACGAACTACACAAAGTCATTATATGCTTTGCTTCATTGCTTGAGTCAGATTATTTACTTGCACTGGAGATGTAGATAGTAATCAACACAGCCAGAAACTCTTTCAGGGAATGCCCTCTAATTTAATGAATGTGTTAGTGTCACCAGACACTGCACTGTTTTTAATGATGTGACAAAAAAAACTGTTGCACCAAAGACGTTCTTGTAGTAATCATGGGCTAGGATATGTTTGAAAATACAATGTAATGTGATTTTGGTACTGTGGCTACCATCTTATAGATCCTTAAAGCATTATATTGGAAGTTTCATATGATGAGTAATGGGTCTCAGCTGAATCAAATATTTGGGTTCATGAGTGCAGGTCACATTTAGAACTCAACAGAACCTTTCAATATATATTGAATCTCTCTCAGCATCTTCAATATTAGTAACTGATCTTTTGGGCCCATCCATTTTCCAATTGATATTGGATTCTGGAATTTTGAACTCACTGGAGAGAATATTATAGTGACCTGCTGCACACTTCTACATCTGCACCTCAGCAACTAGTGCTCAATTGATATATTTACTTGAATTTATATATAATCTTACTTGAATTTATGTATAATTTATATATAATGTATATGTTAAAACGGGTGGTGACTGAGGACGGGCGCAACTGGGACCGAATGATCTCCTATGTGTTCTTTGGGATCTGAGATGTGCCCCAAGTTCCACCGGCTTTACCCCGTTCGAGTTACTGTTTGGACGACTACCCCATGGGTTGATAGACATGGAGGCCTGGGAGCAACAACCCCCCCCGCACAGTGGTTGACCATGTTCGAGAAATGAAAAAAAGAATTGAACGGATAATGCCTCTGGTCAACGAACACCTGATTAAATCCCAGCGTGCCCATCAGCGACTCTACGATCGGCCAACCCAGCCCCGGGAGTTCCTTCCGGGTGACCAAGTCCTAGTCTTAGTTCCAAATGTGGCCTGTAAATTCCTGGCCTCCTGGCAAGGCCCGTACACCGTCATTGAGAGACTGCCAGCGGTGACCTTGATAGCAGACAAAGCTGATCCTGTGGTAGACCTGACCAAGAATGGCCAGCCAGATAAAGTGCAGTGGAATGCTACAGCCAAGAGAGCCTTCCCGAAGACTATAGACAATGTTGATCTCTGCGCCAGTGCTACAGTACATGTCCCGGATTTCTCCCTGCCATTCGTCCTCCAAATGGATGCCTCCGACACGGGCCTAGGAGCTGTACTGTCTCAAATCGTCCAAGGAGAAGAAGTTCCTGTAATGTTCATCAGCCAGAAACTTACCCCTGCCGAAACACAGTATGCAGCAATCAAGAAAGAGGCCCTGACCATAAAATGGACTGTTGAGGAGCTCAAGTACTATCTTCTAGGTTATTCCTTCACCCTGGTGACAGACCATGCCCCTCTGCAGTGGATGACAAGGGAAAAGGCATTGTGTTCAGACATCGAGCTGTTTCTATCAATAGCAATGCTAATGCACTCTCCAGGATGTTCTCTGGCTGGTCAGGTCTGTTCAATGAGTCAGTGTGGCTTTACACCAAATGTAAATTCCTTCACTGTTGTTCTCTGTGCGGTGACCGTCATCCTAGAAGTGTTTGTCCTCGCAGGTCATTTCAGTTTCACTATACGTATTATTCCCCATGGCTGCGCGTTCATATCCAGACTTCTAGATCTGTCAAAAACCGTTCTACATCTAAATTACTTAATCACGCTTGACAAAGGTTGCTTTTCCGAATTATGCTCCTGGACACGTTTACTCAACGAATGGAATGAGATCTCTTTCTTTTACAATGGTACCTTTGAAACCTCTAGCTCCATTCAGTATTTCACAGATGCTGCTCCATCTATAGGTTTCGGAGGGCTATTTGGGAACAAGTGATTCACGCACAAATGGCAGATCCAAATACTTAACCTTCCATCTGATCAAAAATCTACCGTGCTATTTGAAATCTACCCCATTGCAATCTCGTGCTTGCTATGGGGAAACAAATGGTCGCGAAAAAGATCAGTTTTTTGTGATAACCAAGCTGCCGTAGAAATAATTAATAAA

Function

NR:

description
reverse transcriptase/ribonuclease H, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_14376741_14381102.mRNA True 2236 mRNA 0.42 5 14376570 14382093

Neighbor

gene id symbol gene type direction distance location
CI01000026_14156809_14170720 CDH11 coding downstream 205850 14156349 ~ 14170720 (-)
CI01000026_13744060_13791879 CDH8 coding downstream 584691 13744060 ~ 13791879 (-)
CI01000026_13299234_13300178 NA coding downstream 1075630 13298482 ~ 13300940 (-)
CI01000026_13082079_13210565 ITFG1 coding downstream 1166005 13082079 ~ 13210565 (-)
CI01000026_13053390_13065531 NETO2 coding downstream 1311039 13051213 ~ 13065531 (-)
CI01000026_14680424_14682203 TK2 coding upstream 298266 14680359 ~ 14682203 (-)
CI01000026_14684215_14684738 NA coding upstream 302110 14684203 ~ 14685091 (-)
CI01000026_14697383_14715245 CMTM4 coding upstream 314950 14697043 ~ 14715245 (-)
CI01000026_14720591_14737569 DYNC1LI2 coding upstream 337723 14719816 ~ 14737569 (-)
CI01000026_14780225_14789500 NAE1 coding upstream 397995 14780088 ~ 14790709 (-)
G135771 NA non-coding downstream 41662 14334571 ~ 14334908 (-)
G135725 NA non-coding downstream 75327 14300775 ~ 14301243 (-)
G135633 NA non-coding downstream 151009 14225344 ~ 14225561 (-)
G135632 NA non-coding downstream 152118 14224159 ~ 14224452 (-)
G135631 NA non-coding downstream 153179 14223096 ~ 14223391 (-)
G135886 NA non-coding upstream 21804 14403897 ~ 14404114 (-)
G135917 NA non-coding upstream 66513 14448606 ~ 14448839 (-)
G135927 NA non-coding upstream 80184 14462277 ~ 14462577 (-)
G136118 NA non-coding upstream 192373 14574466 ~ 14574723 (-)
G136107 NA non-coding upstream 194078 14576171 ~ 14579318 (-)
G133802 NA other downstream 3069389 11301915 ~ 11307181 (-)
G133790 NA other downstream 3538965 10834015 ~ 10859589 (-)
CI01000026_10788054_10788652 CD59 other downstream 3586416 10787339 ~ 10789709 (-)
CI01000026_10347872_10351783 CEBPA other downstream 4027613 10347746 ~ 10351783 (-)
G132721 NA other downstream 4825926 9550030 ~ 9550644 (-)
G136110 NA other upstream 172824 14554917 ~ 14555436 (-)
CI01000026_16756776_16760261 RBPMS2A, RBPMS2B, RBPMS2 other upstream 2374636 16756729 ~ 16761341 (-)
G137667 NA other upstream 2424271 16806364 ~ 16808372 (-)
G137914 NA other upstream 2601158 16983251 ~ 16984352 (-)
G137967 NA other upstream 2686255 17068348 ~ 17069433 (-)

Expression


Co-expression Network