CI01000026_15604078_15614242


Basic Information

Item Value
gene id CI01000026_15604078_15614242
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 15603964 ~ 15614655 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_15604078_15614242.mRNA
AGAAACAGATGTTATGGATTATAAAGTGTTTGGAAACACATAAATATATTTGTGTAAAACCGCTGCGGTGATTATGCGCACAAACCTACAGAGATTAAAAAGAAAAAAACATGTTGCACTTTTGATACGGCACCCCTAGTGGAGGGGGCGAAAGAGAAATTCAGTCTGCGCAGATCTGACTGGAAATTGTCAAAATATTTGCAGCAGAGGAATTTCAACATGCGAGCGGCTTGGGCTCCCCTACAAAGGACCCATCTTCCCTGAGTAACAAGTGGAGGGAATGAGTGCCGACAGAGAAGCTAAAATCCCTCAGGCTAAAGAAATCCAGCTATTGTAGTAATAGCCCCCGAGACCTGGCTGAGTATGTACAGCTTTCAGAGGTACTTCTCATCCTATTTGTAGCCCCACCAGTGATGTATGTGAGCGTGCGTGTGCGTACTGTGGCGTCCATTTTAACCAGGCTGCCCTCCAGGGGGCTGCCGTCCCTCACACTCAGGGTGGATGGTGCACCAGTTGGGGTCACGACCTGGAAACAGTTCAAGGGAGAGAATTATGAGAAAGGGGGGAAAAAAAACTTAGTGGGATACAAAACATCTGCACACATCTGTTCAGCTCTGTCATCTGTGCATGGGCTAACTTTAACGGATTCTTCCGCCATGAGGGGAGAGAGGCCTGAGACTTCGGAGCTGGAGAGGAAGAGGGCAACGACGGGGTGGAGGCGTGAGAAAGAGGAAAAGGGGTCCAGACAGCGGTCGAGACACGCGCTCAGAGACGTGGGAGAAGGTCCTCTGAAAAGGTACTTCGGATCTGATACATTGGTCCCTTATGTGAGCCCTCTGCGAAGCTCTCCCAACTCCATTACTGTTTCCCTTCCTCTTCATCGGGGGGCTGGAATACATGTGTGGCGGATCTACAAGTCTGACGATGATTTAGTCAAATATTACAGAGGCAAATATTTAGAGCCGACTTCTAGGTTTTCAGCATCTGATGAGACTATACGTTTGTACGTTCTCCATATTCTTCAGGCCACAGTTTAGATAATGCATCTGAACGCTTCTCCAAAATCCCACCCGCCGTTGATGAACTGAGAGAAGTGTATAATGTCTATGACTGATAACTGGACCAATGCTAATTTAAATCATCTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_15604078_15614242.mRNA True 1151 mRNA 0.47 6 15603964 15614655

Neighbor

gene id symbol gene type direction distance location
CI01000026_15457228_15461956 NA coding downstream 142008 15457198 ~ 15461956 (-)
CI01000026_15444272_15445552 NA coding downstream 158412 15444052 ~ 15445552 (-)
CI01000026_15410940_15426472 SHCBP1 coding downstream 177492 15410800 ~ 15426472 (-)
CI01000026_15217144_15334733 NA coding downstream 268789 15216946 ~ 15335175 (-)
CI01000026_15189520_15194928 NA coding downstream 408993 15189321 ~ 15194971 (-)
CI01000026_15617263_15620665 NA coding upstream 2265 15616920 ~ 15620947 (-)
CI01000026_15780006_15782114 NA coding upstream 164995 15779650 ~ 15782275 (-)
CI01000026_15930136_15933539 TSHZ3B, TSHZ3 coding upstream 315148 15929803 ~ 15933539 (-)
CI01000026_16297047_16419596 NA coding upstream 681987 16296642 ~ 16419739 (-)
CI01000026_16432592_16456842 NA coding upstream 817872 16432527 ~ 16456842 (-)
G136957 NA non-coding downstream 14704 15589031 ~ 15589260 (-)
G136946 NA non-coding downstream 27498 15576241 ~ 15576466 (-)
G136935 NA non-coding downstream 36170 15567059 ~ 15567794 (-)
G136924 NA non-coding downstream 45879 15557809 ~ 15558085 (-)
G136865 NA non-coding downstream 129256 15474504 ~ 15474708 (-)
G137006 NA non-coding upstream 64203 15678858 ~ 15679642 (-)
G136993 NA non-coding upstream 100878 15715533 ~ 15716625 (-)
G137042 NA non-coding upstream 155993 15770648 ~ 15777288 (-)
G137092 NA non-coding upstream 236710 15851365 ~ 15851646 (-)
G137094 NA non-coding upstream 240346 15855001 ~ 15855278 (-)
G136110 NA other downstream 1048528 14554917 ~ 14555436 (-)
G133802 NA other downstream 4296783 11301915 ~ 11307181 (-)
G133790 NA other downstream 4766359 10834015 ~ 10859589 (-)
CI01000026_10788054_10788652 CD59 other downstream 4813810 10787339 ~ 10789709 (-)
CI01000026_10347872_10351783 CEBPA other downstream 5255007 10347746 ~ 10351783 (-)
CI01000026_16756776_16760261 RBPMS2A, RBPMS2B, RBPMS2 other upstream 1142074 16756729 ~ 16761341 (-)
G137667 NA other upstream 1191709 16806364 ~ 16808372 (-)
G137914 NA other upstream 1368596 16983251 ~ 16984352 (-)
G137967 NA other upstream 1453693 17068348 ~ 17069433 (-)

Expression


Co-expression Network