CI01000026_15617263_15620665


Basic Information

Item Value
gene id CI01000026_15617263_15620665
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 15616920 ~ 15620947 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_15617263_15620665.mRNA
ATACCTGAAATCCAGACATGCCCCACTGAAGCAATCACACTTATTCATCCTTGATTTATAAAGCTGGTCGACGTTAAGCCTTGAGTTTGTGCTAAGAGGGTTGCCCTTTGACCTTTAGGATAACCCCAGTTTGTTTGCATTTCTGTATGAATGCGTGTGGCGTCTGCAGTAGAGCGTGTAGAAACGCTTTTCTCCGACTGGTCACCTTTTCAATGTCCATCAGGATTTCCTCACTAATCCCAATGGATCATCCTATCAGTGCTTAAAGCATGTTTATGTGTAATGGAATCCATCTTTCTCGATTCATACCACTCCCCCTGCTTCTCCCTCTGCTTTCTTCCCAATTTTTTTATCAAATTTTCCTTAGGCCAGCAGTTCTCTCGTTTTGAGAACAGACTTCTCAGCTCCTCTCAAACACCTGCTCTATTCCTCCACACAGTCCCACGATGCTCTCTTCTCTCCAGCTATTTCTCTCTCTTCCTAGGCTTGAAGCAGACACAGAAACCCCACATCACATTTCTCTTTCTCTCTTTCTCTCGTGCGCGCTCTGCTACGGCTGTGGTTAGGGCGCTCACTGAGGCGTTGCGAGTTAAGTGGCCTGCCCAGAGGGAGCGTGGAGCTACGCCGTGGCCCACCTGGGCCTTGATCCCGAGACCCCCTGCGCCTCCAGTCGTGTGGGTTTGGAGTGGATTGGATCGTCCACATTACCACAGGCTGATCTATACTGACAGCCTTATTTACAAAAACATGGGGAAGAGTAACAAGGCAAGTTACCCCACACTCTCTCCTTCACTCACTTAACTTAGCTTTCTCCCAATTACAACGATTGGCACAGACGCCATAACAAAAGAGATGAAACGGGCAACTTAAGAGACAGACAACAACACTTCGTGATCAAGACTGAAAAAAAAAGGGAGCAGGCGAGAGAACAAAAACAATAACAGACAAGAAAGGGGGAGAGGGAAAAGAAGCTGAATTGTGAAAATTGGCGGAGATTGTGGGAGATGTGTTATGGGTAAGCGTCAGCAGGAGGGGAGAAACACATCTTAAGACTTAAAAGGTGTGTAAAGTAAGCTGAGCATCGGGGGAATTCTCTCCGAGAGCCCCTTTAAAATTCACCTCTGTATTAAGGCAGATAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_15617263_15620665.mRNA True 1144 mRNA 0.47 4 15616920 15620947

Neighbor

gene id symbol gene type direction distance location
CI01000026_15604078_15614242 NA coding downstream 2265 15603964 ~ 15614655 (-)
CI01000026_15457228_15461956 NA coding downstream 154964 15457198 ~ 15461956 (-)
CI01000026_15444272_15445552 NA coding downstream 171368 15444052 ~ 15445552 (-)
CI01000026_15410940_15426472 SHCBP1 coding downstream 190448 15410800 ~ 15426472 (-)
CI01000026_15217144_15334733 NA coding downstream 281745 15216946 ~ 15335175 (-)
CI01000026_15780006_15782114 NA coding upstream 158703 15779650 ~ 15782275 (-)
CI01000026_15930136_15933539 TSHZ3B, TSHZ3 coding upstream 308856 15929803 ~ 15933539 (-)
CI01000026_16297047_16419596 NA coding upstream 675695 16296642 ~ 16419739 (-)
CI01000026_16432592_16456842 NA coding upstream 811580 16432527 ~ 16456842 (-)
CI01000026_16553812_16554906 NA coding upstream 932435 16553382 ~ 16555883 (-)
G136957 NA non-coding downstream 27660 15589031 ~ 15589260 (-)
G136946 NA non-coding downstream 40454 15576241 ~ 15576466 (-)
G136935 NA non-coding downstream 49126 15567059 ~ 15567794 (-)
G136924 NA non-coding downstream 58835 15557809 ~ 15558085 (-)
G136865 NA non-coding downstream 142212 15474504 ~ 15474708 (-)
G137006 NA non-coding upstream 57911 15678858 ~ 15679642 (-)
G136993 NA non-coding upstream 94586 15715533 ~ 15716625 (-)
G137042 NA non-coding upstream 149701 15770648 ~ 15777288 (-)
G137092 NA non-coding upstream 230418 15851365 ~ 15851646 (-)
G137094 NA non-coding upstream 234054 15855001 ~ 15855278 (-)
G136110 NA other downstream 1061484 14554917 ~ 14555436 (-)
G133802 NA other downstream 4309739 11301915 ~ 11307181 (-)
G133790 NA other downstream 4779315 10834015 ~ 10859589 (-)
CI01000026_10788054_10788652 CD59 other downstream 4826766 10787339 ~ 10789709 (-)
CI01000026_10347872_10351783 CEBPA other downstream 5267963 10347746 ~ 10351783 (-)
CI01000026_16756776_16760261 RBPMS2A, RBPMS2B, RBPMS2 other upstream 1135782 16756729 ~ 16761341 (-)
G137667 NA other upstream 1185417 16806364 ~ 16808372 (-)
G137914 NA other upstream 1362304 16983251 ~ 16984352 (-)
G137967 NA other upstream 1447401 17068348 ~ 17069433 (-)

Expression


Co-expression Network