XLOC_008444 (spint2)


Basic Information

Item Value
gene id XLOC_008444
gene name spint2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 20239141 ~ 20250516 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016901
ATCCGGGTTCGTTGTAACAGGTGTGGTCATTATAGAGTTCGTTCAACTTCATTTTGCAGTCGCAAACAGTCGGTCATACACGAAAACAGCTGCTGGGACAGGTAAAAAGGAAAACAAAGAATGGCTCAGGTGTGGTTTACAACATCAATCGTCGGTTTTCTATGCTGTTTGTCGGTTCTGAGCGCGTGTATCTGGGACCCAGACACGGAAATCAACCAGGGTCTGGATCCGAAGTCTTTTAATGACAACGCGCCTTACCTGACCCACCTGTCGGAGATCATGAACGTCGAGCAGTGCCAGCGGGCTTGCTGTGAGAGGGAAGACTGCCAGCTTGCCTTAATCGGAAAAACAGCTGACGGCCCGCAAGAATGTAACCTTGTTAACTGTATGAAGGACGGCAAAGACGTGTGTGTTTTGAGCCAGACCACACAGTTCCAGGTGTACCGCAAGATCGCGGAGACCACCAAAGGGCAAAAAAATCAGGCGGAAGTTCGGACTCTGAACACCACAGATCACTGTCGTTTCCCAAGTGCGGTTGGGAATTGTCGTGCTGCCTTCCCAAGGTTTTTCTACGATATCACTGATCAGACCTGCAAGTCTTTCATCTATGGTGGCTGTGGGGGAAACGAAAATAACTTTTACTCCCAGGCGGAATGTGAGGCGTCCTGTCTTGGGGTGAAGGGTGCTGTTGAGGACGCCCGTTCTGTCTCTCCGCGCAGCCGAATGTCTGGACCTGAAATCAAGAATGATGTTGATCCCAAGGCTCTTACTGAAATGACATCAGAGGAATTCCAAGAGAAGTGTCAGTCTCCTGCAGTGACTGGAAATTGCAGAGCCTCCATTAAGCGCTTTTACTACAACAATGGAGTCTGTCAACAGTTCATCTATGGAGGCTGCGGTGGCAACAAGAACAATTATGAATCTGAGGATTCATGCATGACAGCCTGCACAGTGAAGATCATTCCCAAAGAACAGGAGGGCCCTGTCATTCCAGCTATTCCAAAAAGTGCCCACAGCTTTGAAGAGAAATGTGTTGTGCCATCTGACTCGGGGCCGTGCCGTGCATCCTTTCGTATGTTTTTCTTCGAGGCCAGCAGTCAGTCCTGTCAGCCTTTCATCTATGGAGGCTGTAGGGGAAACCTGAACCGCTATGGCAGTGAAGAAGAGTGCATGTCTGTTTGCTCCACCAAAGACGgtcGTTTTGATGAACATGGACATGAGAAACATAGGCGCTGGACTCCGGCATTCTTCCTAGTTGCCACACTGGCCATCATGTCTGCCCTACTGCTAGTGGGTCTGATCCTGATCGTAGTGCGCAGAAACTCCCACCCACACTTCAGGATTCTGGATGATAAGGAGGAGTTGCTGCCAGCAGAGGAGCCTGTGTCTTATGAGAAACTACCCAAAGAAATCTAAAACCTTTCACGGTCGGGTTCAAAACACTCCAAGTTTCAGCTCACTTTAAATTAGCAACAGTTTAAGTTCAATTGGAGTACATTTTCCCACAAATATGCTCCAAATGagtaatatttactttaaaaagtgtgcGTAACTGAGATGCTGTTTCACTGTTGCTCAGATTTGTATACTGTTTTAATTCTGCACTAACGTTTGAGTTGGCTGTTACCTTGTTTGTCACTTTTTTAGGGTTATTATATCAACAGTAATTTCACTTTCAGGGATCTATTTATTATCACAGCCTCGAGCAAAGAGAATTAAACTAATAAAGGGATTTTCCTTGACTTTTgtatatgtaaacatttaaattttacaaCTGATAGAGGAGTTGATTATCTATAGGCTTGTGACACATTTTTAATGATCTCTAGTTTAAAAGTTcagtaattaaaatattttataggcTTTAATTGTAAGCATACATGACAGTTCCATAAATAAAAGTGTGTAATATAAACTGTGACCTGTAATAGCTTCTTACCGCTgtactttatttctttatttctgtttttaaatattgtaattttcaATCTTGAACaataaacttttttcttttttaagtttta
>TCONS_00016902
ACGAAAACAGCTGCTGGGACAGGTAAAAAGGAAAACAAAGAATGGCTCAGGTGTGGTTTACAACATCAATCGTCGGTTTTCTATGCTGTTTGTCGGTTCTGAGCGCGTGTATCTGGGACCCAGACACGGAAATCAACCAGGGTCTGGATCCGAAGTCTTTTAATGACAACGCGCCTTACCTGACCCACCTGTCGGAGATCATGAACGTCGAGCAGTGCCAGCGGGCTTGCTGTGAGAGGGAAGACTGCCAGCTTGCCTTAATCGGAAAAACAGCTGACGGCCCGCAAGAATGTAACCTTGTTAACTGTATGAAGGACGGCAAAGACGTGTGTGTTTTGAGCCAGACCACACAGTTCCAGGTGTACCGCAAGATCGCGGAGACCACCAAAGGGCAAAAAAATCAGGCGGAAGTTCGGACTCTGAACACCACAGGTGCTGTTGAGGACGCCCGTTCTGTCTCTCCGCGCAGCCGAATGTCTGGACCTGAAATCAAGAATGATGTTGATCCCAAGGCTCTTACTGAAATGACATCAGAGGAATTCCAAGAGAAGTGTCAGTCTCCTGCAGTGACTGGAAATTGCAGAGCCTCCATTAAGCGCTTTTACTACAACAATGGAGTCTGTCAACAGTTCATCTATGGAGGCTGCGGTGGCAACAAGAACAATTATGAATCTGAGGATTCATGCATGACAGCCTGCACAGTGAAGATCATTCCCAAAGAACAGGAGGGCCCTGTCATTCCAGCTATTCCAAAAAGTGCCCACAGCTTTGAAGAGAAATGTGTTGTGCCATCTGACTCGGGGCCGTGCCGTGCATCCTTTCGTATGTTTTTCTTC

Function

symbol description
spint2 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Is expressed in liver. Human ortholog(s) of this gene implicated in congenital secretory sodium diarrhea 3. Orthologous to human SPINT2 (serine peptidase inhibitor, Kunitz type 2).

GO:

id name namespace
GO:0005615 extracellular space cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
ko01002 Peptidases and inhibitors

ZFIN:

id description
ZDB-GENE-061013-323 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. Is expressed in liver. Human ortholog(s) of this gene implicated in congenital secretory sodium diarrhea 3. Orthologous to human SPINT2 (serine peptidase inhibitor, Kunitz type 2).

Ensembl:

ensembl_id ENSDARG00000069476

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016901 False 2024 mRNA 0.44 9 20239141 20250516
TCONS_00016902 True 836 mRNA 0.50 6 20239220 20247751

Neighbor

gene id symbol gene type direction distance location
XLOC_008443 zgc:112083 coding upstream 235269 19990068 ~ 20003872 (+)
XLOC_008442 map6b coding upstream 312382 19915345 ~ 19926759 (+)
XLOC_008441 thap12b coding upstream 330232 19900197 ~ 19908909 (+)
XLOC_008440 dyrk1ab coding upstream 342325 19884242 ~ 19896816 (+)
XLOC_008439 alcamb coding upstream 360154 19838458 ~ 19878987 (+)
XLOC_008445 plekhg2 coding downstream 30789 20281305 ~ 20352045 (+)
XLOC_008446 il15l coding downstream 101607 20352123 ~ 20363786 (+)
XLOC_008447 supt5h coding downstream 113343 20363859 ~ 20395249 (+)
XLOC_008448 cox7a1 coding downstream 152568 20403084 ~ 20405796 (+)
XLOC_008449 NA coding downstream 160776 20411292 ~ 20458876 (+)
XLOC_008463 BX663520.1 misc downstream 1001675 21252191 ~ 21252282 (+)
XLOC_008436 NA non-coding upstream 483323 19752881 ~ 19755818 (+)
XLOC_008435 CR626889.1 non-coding upstream 517387 19688875 ~ 19721754 (+)
XLOC_008428 BX324206.3 non-coding upstream 947764 19287632 ~ 19291377 (+)
XLOC_008427 BX324206.2 non-coding upstream 952998 19284842 ~ 19286143 (+)
XLOC_008426 NA non-coding upstream 1051307 19182848 ~ 19187834 (+)
XLOC_008454 CR848784.1 non-coding downstream 646587 20897103 ~ 20901355 (+)
XLOC_008455 NA non-coding downstream 754217 21004733 ~ 21093616 (+)
XLOC_008456 NA non-coding downstream 767133 21017649 ~ 21037778 (+)
XLOC_008457 NA non-coding downstream 913519 21164035 ~ 21164573 (+)

Expression


Co-expression Network