XLOC_008454 (CR848784.1)


Basic Information

Item Value
gene id XLOC_008454
gene name CR848784.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 20897103 ~ 20901355 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016933
AGTGTCGATATAGGGCACCAAGGAGAACTTTAGCAAGATAAAAACATGGACATCAAAGGGGATATTTTAAGTGAAGAGCACCAGAGTGCGGGACCACACCACATCCCCGAGAACCCCCACATGTTTCTCTACAGCACGTCCGTCCCTCTTACCGAACGAGTCCACTGGGATGACCAGCAGGAACAGCAGGCGTCCAGGAGGAGCCAGCATCACACTGCGCTGGATCTCCTGTTTCACCTGCCTGCCGTCCGCCAAGCCGAAGAGACTCCAGCCTGGAGTATCCACCACAGCCAGCCGCAGGCCGTCCACCCAGCCGAACCTCCTCACACAGCGGACAGTCTTCTTGCCAGGCTCAAACTCACTGCGGCCTAGGATGAGGTCTCCTACTGAGCTCTTACCAGAATGCCTTCGTCCCAACAGCACAAGTCCCATCACAGAAGGACTTTCTGGATCCACTTACCATAAAACAAAGAAGCCAAATCAGAGCATTTCAGAGATCAGTAGCAGCCACACTGAATAAAAGTCACGCCACACGCCGTTCTCTCACCACCACAGACTTTCACAACAAACTCCCGGGACTCGCTCAGGAAGTTGAGAAGAAAGGGAGCATGGAGAAGAGAACAAAGCATATACACTGAAAACATGATGACGGGTGggaaagatgatgatgatggtggtgaaaGAACAAGCTGTACTGTAACAGTGCACTTCTGTAACTCTGCAGCTGCCCGCTAGGGGGCGCCTCGACTCTCAAgacaaatacttaaaaaattaaatcatgaAGAGAATCC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097996

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016933 True 791 lncRNA 0.51 3 20897103 20901355

Neighbor

gene id symbol gene type direction distance location
XLOC_008453 ulk2 coding upstream 2327 20843161 ~ 20894776 (+)
XLOC_008452 aldh3a1 coding upstream 87979 20799943 ~ 20809124 (+)
XLOC_008451 sgsm2 coding upstream 253276 20543770 ~ 20643827 (+)
XLOC_008450 tnfaip1 coding upstream 355918 20529197 ~ 20541185 (+)
XLOC_008449 NA coding upstream 438227 20411292 ~ 20458876 (+)
XLOC_008455 NA coding downstream 103378 21004733 ~ 21093616 (+)
XLOC_008456 NA coding downstream 116294 21017649 ~ 21037778 (+)
XLOC_008457 NA coding downstream 262680 21164035 ~ 21164573 (+)
XLOC_008458 CR626907.1 coding downstream 265787 21167142 ~ 21177049 (+)
XLOC_008459 CR626907.3 coding downstream 278739 21180094 ~ 21198286 (+)
XLOC_008463 BX663520.1 misc downstream 350836 21252191 ~ 21252282 (+)
XLOC_008436 NA non-coding upstream 1141285 19752881 ~ 19755818 (+)
XLOC_008435 CR626889.1 non-coding upstream 1175349 19688875 ~ 19721754 (+)
XLOC_008428 BX324206.3 non-coding upstream 1605726 19287632 ~ 19291377 (+)
XLOC_008427 BX324206.2 non-coding upstream 1610960 19284842 ~ 19286143 (+)

Expression


Co-expression Network