XLOC_008455


Basic Information

Item Value
gene id XLOC_008455
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 21004733 ~ 21093616 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018926
CCATGATGCACTTGGACAGATAGTTGAAGACAGTGGCCTTGAGCTCAAAGATCTCTCCACGGATGATGGAGTAAGGTAGAGAGAGCTCCAGGAAGAAGGGCTGGAAAACTGTCAGCTGAGCAGGAGGAGCCAAACCCAGACCTGTGGAGGACAGACAGAAGGCGTCCATCTCCCAAGTCGTGATGGTGTCAGGAACTGTGACAGGAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018926 True 208 lncRNA 0.53 2 21004733 21093616

Neighbor

gene id symbol gene type direction distance location
XLOC_008454 CR848784.1 coding upstream 103378 20897103 ~ 20901355 (+)
XLOC_008453 ulk2 coding upstream 109957 20843161 ~ 20894776 (+)
XLOC_008452 aldh3a1 coding upstream 195609 20799943 ~ 20809124 (+)
XLOC_008451 sgsm2 coding upstream 360906 20543770 ~ 20643827 (+)
XLOC_008450 tnfaip1 coding upstream 463548 20529197 ~ 20541185 (+)
XLOC_008457 NA coding downstream 70419 21164035 ~ 21164573 (+)
XLOC_008458 CR626907.1 coding downstream 73526 21167142 ~ 21177049 (+)
XLOC_008459 CR626907.3 coding downstream 86478 21180094 ~ 21198286 (+)
XLOC_008460 si:dkey-52d15.2 coding downstream 109204 21202820 ~ 21204471 (+)
XLOC_008461 NA coding downstream 146808 21240424 ~ 21245834 (+)
XLOC_008463 BX663520.1 misc downstream 158575 21252191 ~ 21252282 (+)
XLOC_008449 NA non-coding upstream 545857 20411292 ~ 20458876 (+)
XLOC_008436 NA non-coding upstream 1248915 19752881 ~ 19755818 (+)
XLOC_008435 CR626889.1 non-coding upstream 1282979 19688875 ~ 19721754 (+)
XLOC_008428 BX324206.3 non-coding upstream 1713356 19287632 ~ 19291377 (+)
XLOC_008462 NA non-coding downstream 153910 21247526 ~ 21251557 (+)

Expression


Co-expression Network