Gene
RNA
| Item | Value |
|---|---|
| gene id | G130967 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 8188374 ~ 8189073 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU148937 | True | 519 | TUCP | 0.57 | 2 | 8188374 | 8189073 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000026_08107438_08129873 | ESRP2 | coding | upstream | 57894 | 8107438 ~ 8130480 (+) |
| CI01000026_08103907_08104974 | NA | coding | upstream | 82775 | 8103814 ~ 8105599 (+) |
| CI01000026_08096241_08097257 | NA | coding | upstream | 90770 | 8095563 ~ 8097604 (+) |
| CI01000026_08031599_08081760 | PLEKHG4 | coding | upstream | 106469 | 8031599 ~ 8081905 (+) |
| CI01000026_07965621_07990576 | SLC9A5 | coding | upstream | 197731 | 7965576 ~ 7990643 (+) |
| CI01000026_08248451_08250136 | DDX28 | coding | downstream | 59298 | 8248371 ~ 8250221 (+) |
| CI01000026_08297901_08307596 | CTRB1 | coding | downstream | 108784 | 8297857 ~ 8307629 (+) |
| CI01000026_08313929_08318869 | ATP6V0D1, ATP6V0D1.L | coding | downstream | 122722 | 8311795 ~ 8318891 (+) |
| CI01000026_08421799_08434134 | ZDHHC1 | coding | downstream | 232610 | 8421683 ~ 8434193 (+) |
| CI01000026_08447474_08449558 | TPPP3 | coding | downstream | 258323 | 8447396 ~ 8450611 (+) |
| G130962 | NA | non-coding | upstream | 12356 | 8175261 ~ 8176018 (+) |
| G130894 | NA | non-coding | upstream | 262242 | 7922174 ~ 7926132 (+) |
| G130910 | NA | non-coding | upstream | 310606 | 7877354 ~ 7877768 (+) |
| G130857 | NA | non-coding | upstream | 373508 | 7803928 ~ 7814866 (+) |
| G130843 | NA | non-coding | upstream | 401457 | 7785163 ~ 7786917 (+) |
| G130986 | NA | non-coding | downstream | 13768 | 8202841 ~ 8203962 (+) |
| G130993 | NA | non-coding | downstream | 27877 | 8216950 ~ 8217316 (+) |
| G130994 | NA | non-coding | downstream | 28610 | 8217683 ~ 8218352 (+) |
| G131025 | NA | non-coding | downstream | 52802 | 8241875 ~ 8242082 (+) |
| G131028 | NA | non-coding | downstream | 55826 | 8244899 ~ 8245152 (+) |
| G130552 | NA | other | upstream | 1091722 | 7095053 ~ 7096652 (+) |
| G128757 | NA | other | upstream | 1861589 | 6326196 ~ 6326785 (+) |
| G128601 | NA | other | upstream | 2196613 | 5983879 ~ 5991761 (+) |
| G128585 | NA | other | upstream | 2238252 | 5949813 ~ 5950122 (+) |
| CI01000026_04556074_04556964 | FOXB1B, FOXB1, FOXB1A | other | upstream | 3632057 | 4555776 ~ 4557613 (+) |
| G131077 | NA | other | downstream | 312335 | 8501408 ~ 8506787 (+) |
| G132667 | NA | other | downstream | 1379666 | 9568739 ~ 9569160 (+) |
| G133192 | NA | other | downstream | 1970746 | 10159819 ~ 10161961 (+) |
| CI01000026_11075931_11078249 | MDK, MDKA | other | downstream | 2881695 | 11075784 ~ 11079080 (+) |
