XLOC_008457



Basic Information


Item Value
gene id XLOC_008457
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 21164035 ~ 21164573 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00018772
ACCttattaccaaaacatttttcaaTGTCTAAACTTTTGCTAGCGGCAATAATATTTTCACTGGGCAGAACACAGTACGCTAGAATCCGCACTACAGGAGCCACATCTGCACCAACAGACAGTTCGAAGGACATTGTGCCACTTGCTACTCCATTTGAAGACTTCACTTCAACTTTCTCATACCCATGATGAACAATCACTCCTTTGGACAAGACTATATAGACAATGTCAGTATTGAAGTCTTCAACCGTCTCTCCAACAAAATAATACTTTACAGTGGCTGTAATCTCAGTGCCACACTTTATCGGCTGCTCAATATTCTCTATTATCAGTTTACTAAATGTTGGGGAGTATGGAGTTGCGGTCTGGAAgagtttaactgtttttttatcTCTAGAGAAGTAAGGTGTTTTGTACTGACGAAAACGGGTATCTGGATACACATTTGC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00018772 True 449 lncRNA 0.40 2 21164035 21164573

Neighbor


gene id symbol gene type direction distance location
XLOC_008455 NA coding upstream 70419 21004733 ~ 21093616 (+)
XLOC_008456 NA coding upstream 126257 21017649 ~ 21037778 (+)
XLOC_008454 CR848784.1 coding upstream 262680 20897103 ~ 20901355 (+)
XLOC_008453 ulk2 coding upstream 269259 20843161 ~ 20894776 (+)
XLOC_008452 aldh3a1 coding upstream 354911 20799943 ~ 20809124 (+)
XLOC_008458 CR626907.1 coding downstream 2569 21167142 ~ 21177049 (+)
XLOC_008459 CR626907.3 coding downstream 15521 21180094 ~ 21198286 (+)
XLOC_008460 si:dkey-52d15.2 coding downstream 38247 21202820 ~ 21204471 (+)
XLOC_008461 NA coding downstream 75851 21240424 ~ 21245834 (+)
XLOC_008462 NA coding downstream 82953 21247526 ~ 21251557 (+)
XLOC_008463 BX663520.1 misc downstream 87618 21252191 ~ 21252282 (+)
XLOC_008449 NA non-coding upstream 705159 20411292 ~ 20458876 (+)
XLOC_008436 NA non-coding upstream 1408217 19752881 ~ 19755818 (+)
XLOC_008467 NA non-coding downstream 158473 21323046 ~ 21495896 (+)

Expression



Co-expression Network