G131878


Basic Information

Item Value
gene id G131878
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 8584712 ~ 8584943 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU149998
TATTTGTCTGCTGTCTGTGAGACATCACGTCACCTTAGCTAATTCCAGCCACTGAACTTGGCATCTCTGCCATGTTTGTGCTTTTTTTCGGGATTATTTCATACAATTATCAAATAATATGGCTTGCTGTGTGGTTAATGGTCGAGACAGTACGTCTGTGTACATGTGCACGCATGCAGAAGATAAACACAACACACGTTGTTGGATCATCTTGTCATTGGCTAAAAGTCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU149998 True 232 lncRNA 0.42 1 8584712 8584943

Neighbor

gene id symbol gene type direction distance location
CI01000026_08474877_08483134 NA coding upstream 101444 8474877 ~ 8483268 (+)
CI01000026_08454661_08461606 NA coding upstream 122791 8454661 ~ 8461921 (+)
CI01000026_08447474_08449558 TPPP3 coding upstream 134101 8447396 ~ 8450611 (+)
CI01000026_08421799_08434134 ZDHHC1 coding upstream 150519 8421683 ~ 8434193 (+)
CI01000026_08313929_08318869 ATP6V0D1, ATP6V0D1.L coding upstream 265821 8311795 ~ 8318891 (+)
CI01000026_08944583_08947981 NA coding downstream 359583 8944526 ~ 8947993 (+)
CI01000026_08950735_08960908 NA coding downstream 365720 8950663 ~ 8961146 (+)
CI01000026_09076625_09079154 IRX3A, IRX3 coding downstream 490273 9075216 ~ 9079338 (+)
CI01000026_09175446_09178464 NA coding downstream 590306 9175249 ~ 9178488 (+)
CI01000026_09339450_09352303 AKTIP coding downstream 754507 9339450 ~ 9353177 (+)
G131877 NA non-coding upstream 597 8583734 ~ 8584115 (+)
G131875 NA non-coding upstream 5996 8578486 ~ 8578716 (+)
G131873 NA non-coding upstream 10389 8574124 ~ 8574323 (+)
G131872 NA non-coding upstream 10871 8573471 ~ 8573841 (+)
G131861 NA non-coding upstream 12181 8572298 ~ 8572531 (+)
G131890 NA non-coding downstream 75094 8660037 ~ 8660350 (+)
G131919 NA non-coding downstream 123536 8708479 ~ 8708689 (+)
G131975 NA non-coding downstream 211362 8796305 ~ 8797848 (+)
G131986 NA non-coding downstream 222165 8807108 ~ 8807310 (+)
G131987 NA non-coding downstream 222405 8807348 ~ 8807569 (+)
G131077 NA other upstream 77925 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 285298 8297857 ~ 8307629 (+)
G130967 NA other upstream 395639 8188374 ~ 8189073 (+)
G130552 NA other upstream 1488060 7095053 ~ 7096652 (+)
G128757 NA other upstream 2257927 6326196 ~ 6326785 (+)
G132667 NA other downstream 983796 9568739 ~ 9569160 (+)
G133192 NA other downstream 1574876 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 2485825 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 2659990 11241496 ~ 11246204 (+)
G133542 NA other downstream 2891174 11476117 ~ 11477544 (+)

Expression


Co-expression Network