G132219


Basic Information

Item Value
gene id G132219
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 8969151 ~ 8969490 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU150363
TGAAAATCTGGAATCTAAGAGTGCAAAAAAATCTAAATATTGAGAAAATCGCCTTTAAAGTTGTCCAAATGAAGTCCTTAGCAATGCATATTCACTCACAAAAATACATTTTTTATATATTTACGGTAGTAAATTTACAAAATATCTTCATGGAACATGATCTTAATATCCTAATGATTTTTGGCATAAAAGAAAAATCGATAATTTTGACCCATACAATGTATTGTTGGCTAATGCTACAAATATACCCGTGCGACTTCTGACTGGTTTTGTGGTCCAGGATCACATTTAGTAAAATATTTGACTGTGTGGATGAAGTGTAAATTGGAAAACTCCCAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC105418166

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150363 True 340 lncRNA 0.31 1 8969151 8969490

Neighbor

gene id symbol gene type direction distance location
CI01000026_08950735_08960908 NA coding upstream 8005 8950663 ~ 8961146 (+)
CI01000026_08944583_08947981 NA coding upstream 21158 8944526 ~ 8947993 (+)
CI01000026_08474877_08483134 NA coding upstream 485883 8474877 ~ 8483268 (+)
CI01000026_08454661_08461606 NA coding upstream 507230 8454661 ~ 8461921 (+)
CI01000026_08447474_08449558 TPPP3 coding upstream 518540 8447396 ~ 8450611 (+)
CI01000026_09076625_09079154 IRX3A, IRX3 coding downstream 105726 9075216 ~ 9079338 (+)
CI01000026_09175446_09178464 NA coding downstream 205759 9175249 ~ 9178488 (+)
CI01000026_09339450_09352303 AKTIP coding downstream 369960 9339450 ~ 9353177 (+)
CI01000026_09365911_09428712 CHD9 coding downstream 395417 9364907 ~ 9429076 (+)
CI01000026_09602263_09635635 TOX3 coding downstream 632153 9601643 ~ 9636994 (+)
G132043 NA non-coding upstream 26052 8942854 ~ 8943099 (+)
G132041 NA non-coding upstream 27912 8940475 ~ 8941239 (+)
G131963 NA non-coding upstream 80776 8887122 ~ 8888375 (+)
G131960 NA non-coding upstream 104755 8862513 ~ 8864396 (+)
G132014 NA non-coding upstream 119709 8849237 ~ 8849442 (+)
G132275 NA non-coding downstream 42024 9011514 ~ 9058423 (+)
G132289 NA non-coding downstream 89318 9058808 ~ 9059309 (+)
G132302 NA non-coding downstream 122575 9092065 ~ 9092387 (+)
G132306 NA non-coding downstream 131159 9100649 ~ 9100890 (+)
G132315 NA non-coding downstream 148173 9117663 ~ 9117942 (+)
G131077 NA other upstream 462364 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 669737 8297857 ~ 8307629 (+)
G130967 NA other upstream 780078 8188374 ~ 8189073 (+)
G130552 NA other upstream 1872499 7095053 ~ 7096652 (+)
G128757 NA other upstream 2642366 6326196 ~ 6326785 (+)
G132667 NA other downstream 599249 9568739 ~ 9569160 (+)
G133192 NA other downstream 1190329 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 2101278 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 2275443 11241496 ~ 11246204 (+)
G133542 NA other downstream 2506627 11476117 ~ 11477544 (+)

Expression


Co-expression Network