G132316


Basic Information

Item Value
gene id G132316
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 9118219 ~ 9118633 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU150469
ACACACACACACACACACACACACACACCGGGTATTTAATTCCACATGCACCTGGTCATCTTCCTCTCACCTACAGTGATGTAAGATATAGAATCTACTGATGACCTTCCTTAGAACAATGCATACCTGTGCACACATGCCTGAAAACAGACTGCAGTGAAGTTTAGAGTGGCCATTCACCAATCACCTGCTCACCTGAGGCTCAGCCATCTATCACACCTTCACTACAGACTAGAGGAAACACCCCCAACACCTACAGGCAGCGCGCGCACACGCGCGCACACGCGCGCACACACACACACACACACACACACACACACACACATCCTTGTTTATACTACTTTGTGGGGTAGTAAGATAGTAAGATGAGGAATTTACGACATTGTGGGGTCCTTTAGTCAAACCCCACAAAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150469 True 415 lncRNA 0.48 1 9118219 9118633

Neighbor

gene id symbol gene type direction distance location
CI01000026_09076625_09079154 IRX3A, IRX3 coding upstream 38881 9075216 ~ 9079338 (+)
CI01000026_08950735_08960908 NA coding upstream 157073 8950663 ~ 8961146 (+)
CI01000026_08944583_08947981 NA coding upstream 170226 8944526 ~ 8947993 (+)
CI01000026_08474877_08483134 NA coding upstream 634951 8474877 ~ 8483268 (+)
CI01000026_08454661_08461606 NA coding upstream 656298 8454661 ~ 8461921 (+)
CI01000026_09175446_09178464 NA coding downstream 56616 9175249 ~ 9178488 (+)
CI01000026_09339450_09352303 AKTIP coding downstream 220817 9339450 ~ 9353177 (+)
CI01000026_09365911_09428712 CHD9 coding downstream 246274 9364907 ~ 9429076 (+)
CI01000026_09602263_09635635 TOX3 coding downstream 483010 9601643 ~ 9636994 (+)
CI01000026_09666763_09669325 NA coding downstream 548047 9666680 ~ 9669702 (+)
G132315 NA non-coding upstream 277 9117663 ~ 9117942 (+)
G132306 NA non-coding upstream 17329 9100649 ~ 9100890 (+)
G132302 NA non-coding upstream 25832 9092065 ~ 9092387 (+)
G132289 NA non-coding upstream 58910 9058808 ~ 9059309 (+)
G132275 NA non-coding upstream 59796 9011514 ~ 9058423 (+)
G132377 NA non-coding downstream 105216 9223849 ~ 9228165 (+)
G132412 NA non-coding downstream 180041 9298674 ~ 9299158 (+)
G132421 NA non-coding downstream 315458 9434091 ~ 9434320 (+)
G132429 NA non-coding downstream 327197 9445830 ~ 9446032 (+)
G132637 NA non-coding downstream 399963 9518596 ~ 9518908 (+)
G131077 NA other upstream 611432 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 818805 8297857 ~ 8307629 (+)
G130967 NA other upstream 929146 8188374 ~ 8189073 (+)
G130552 NA other upstream 2021567 7095053 ~ 7096652 (+)
G128757 NA other upstream 2791434 6326196 ~ 6326785 (+)
G132667 NA other downstream 450106 9568739 ~ 9569160 (+)
G133192 NA other downstream 1041186 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 1952135 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 2126300 11241496 ~ 11246204 (+)
G133542 NA other downstream 2357484 11476117 ~ 11477544 (+)

Expression


Co-expression Network