XLOC_008465 (gkup)


Basic Information

Item Value
gene id XLOC_008465
gene name gkup
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 21262917 ~ 21275683 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016949
TGAGCATGTTTCTTTAAGGATTCGTAGGGTTTCCGAATCCGGTGACGCGACTCAGTTCATGGTTGTAACTGTCATTAGTTGCACTATGGACTTTTCACAGACCCTTTGATGAAAGGATTGTACGTTGCTATTtccaataaataaaaagtcagaGCAATGATTTGCATACTTTTAGTTGCAGGGCACGGTACGGTTTTGGAGACACAAATAAAGAATGATGTCTCGGGTCTGTATGCTCACCTGACCGGTGTGCCCAAAGCTCTGCTACCTGGAGTCGGGGGAAAGAAAATATTGGATTTCTGGTGGGAAGCTGTCAACACTCGTCAGCTCTTCAGTGAAGTCTATCTCGTGACAAATGCTGACAAaTACAAACACTATGAACGATGGGCAACAGCAAATGACTTTCCAGTGGAGAATGTTGTGAATGATGGCAGCACTACTTTGGACGACAGACTTGGTGCTGTTGCAGATGTTGAGTTGGCCATCCGAAGCCGACAGCTACAAGATGACATTATGGTGATTGCAGGAGACATGCTTTGTTCTGATCAGAACTTTGATATTGCTCAAGTCATTCGCTTTTTCAGGTCCAAGCCTGGAGAACTTGCTATATATTATGAGCTGGAGTCAGGAGAGAAGAGCTATTCCAGAGGCATTGTTAAAGTTTGTCCAAACACCCATCGGGTGACGCGTTTCCTCGAGAAGCCACAGGAGGGCGTCACAGCATCTCGTCTGGCCAGTGTGGTTTTCTACTGTCTGCGCAAGGAGTCATTAACGTACATATCCGAATTCCTCAATAAACATCCAGATGTTAAAGACAGAACTTTTGGCAAGTTTTGGGAATGGCTTGTAAATGAGGAGAAGGTACCTGTCTATGGAATGAAGTTACCAACAGGATTTCAACTAATTGGACAAGTGGGTCTGTCTGATTACACTAAATGGCTTGCTCACTACTCTTCAAAGCAGCAGCTGTCCCCATCTAAACCCATTACATGCCGCTCTTATGCCAGGGTTGGACTGATGGGAAACCCCTCTGATGGTTTCAATGGGAAAACCATTGCTATGAGCATCTCTAACTTTTGGGCCGAGGTCACACTTATGGAGAGCCAGACtctgGTCCTTCTTCCTCATCCTCTGAACGATCCCACAGAATTTGGAGGCTTGCAGGATCTCTTTCGGATAAGCCGGAAAGAAGGGTATTTGGGAGGTCTGAGACTTCTGCAAGCCACCTGTAAAAAGTTTTACCAATTCTGCTCAGAACAAGGAATTGCTCTGTCTAAGCAGAATTTTACTCTTAAGTATGATACAAACATTCCTCGACAAGTGGGATTAGCTGGCAGTAGTGCTATTGTGTCTGCCACCTTGAAGTGCCTGATGAAGTTTTACAACATCACAGACAATGATCTTCCACAACCAGTCAGAGCCAACTTCATCCTCAACGTAGAGACTGATGAGCTGTTCATCACAGCTGGTCTACAGGACAGAGTTGTGCAGGTCTACGAGGGCCTGGTTTACATGGACTTCAGCAAACAGCTTATGGATGAACGTGGTTATGGAGAATACATTCCCTTGGACATGCGTGATCTTCCCATGTTCTGGCTGGCTTACTTGAGCGATCCAAGTGATTCCGGAAGGATTCACAGTAATGTTAGACAGCGCTGGTTAAACGGTGAACCCGCTGTTGTTGAAGCTATGAAATCATTTGCTGAACTCACAGACCAATCTCGGGCAGCATTCCAGTGTAAGGACTGGGCCAGACTTGCACAGCTCATGGATGAAAACTTTGAGCTACGGCGGTCGGTCTATACTGATGACTGCTTGGGTCCTGGAAATCTAAAAATGGTACAGCTTGCAAGACAGTTTGGATCTGCAGTGAAGTTGCCCGGCAGTGGGGGTGCAGTGGTAGGCTTGTGTATGGATCAGGAGCGACTGATGGAGATGAAGAGGGCTTTCCAAGAGGCAGgatgtgtgttttgtttgatcGTGCCCTATGACCCATCAGTACAGGGTCAGAACTGATCACCCAGAGGAAagcttttatattattttatttctcacAAAGAAGATGTGTTGAAAAGGCTCTGCTAGCAGAACATACTGCCCAAAATtttaattatgtcatcatttttacattttcccgATGTACCAAACCTgtatgtctgtttttgttttgttgaaaataaaacaaatctattttGAGACTTTCA
>TCONS_00016950
CAACTAGGGAAGTGGATCAAATCTCCAACAgacaatttattttcttttatgatGAGCAGTGACACTTGAATCTACATCACAGTACTGAAGAAAAGATCTGTTTAATTTCAACCAttcaacaaacattttttgtgtttacaGAATTGCTCTGTCTAAGCAGAATTTTACTCTTAAGTATGATACAAACATTCCTCGACAAGTGGTGAGACTTTGATTTGAAGTTGCTtatcttgatttaaatttttaaacgtGTATTGATAAGATTATAATGTACTACATTTCTTTTATCACCTCTAGGGATTAGCTGGCAGTAGTGCTATTGTGTCTGCCACCTTGAAGTGCCTGATGAAGTTTTACAACATCACAGACAATGATCTTCCACAACCAGTCAGAGCCAACTTCATCCTCAACGTAGAGACTGATGAGCTGTTCATCACAGCTGGTCTACAGGACAGAGTTGTGCAGGTCTACGAGGGCCTGGTTTACATGGACTTCAGCAAACAGCTTATGGATGAACGTGGTTATGGAGAATACATTCCCTTGGACATGCGTGATCTTCCCATGTTCTGGCTGGCTTACTTG

Function

symbol description
gkup Enables glucuronokinase activity. Predicted to act upstream of or within biosynthetic process.

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0016779 nucleotidyltransferase activity molecular_function
GO:0047940 glucuronokinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080204-36 Enables glucuronokinase activity. Predicted to act upstream of or within biosynthetic process.

Ensembl:

ensembl_id ENSDARG00000069409

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016949 False 2204 mRNA 0.45 23 21262917 21275683
TCONS_00016950 True 582 lncRNA 0.39 5 21269223 21272557

Neighbor

gene id symbol gene type direction distance location
XLOC_008464 usf1 coding upstream 350 21252532 ~ 21262567 (+)
XLOC_008462 NA coding upstream 11360 21247526 ~ 21251557 (+)
XLOC_008461 NA coding upstream 17083 21240424 ~ 21245834 (+)
XLOC_008460 si:dkey-52d15.2 coding upstream 58446 21202820 ~ 21204471 (+)
XLOC_008459 CR626907.3 coding upstream 64631 21180094 ~ 21198286 (+)
XLOC_008466 ubash3bb coding downstream 1052 21276735 ~ 21320638 (+)
XLOC_008467 NA coding downstream 47363 21323046 ~ 21495896 (+)
XLOC_008468 dre-mir-100-1 coding downstream 161950 21437633 ~ 21437728 (+)
XLOC_008469 dre-let-7a-2 coding downstream 162193 21437876 ~ 21437959 (+)
XLOC_008470 NA coding downstream 244727 21520410 ~ 21542918 (+)
XLOC_008463 BX663520.1 misc upstream 10635 21252191 ~ 21252282 (+)
XLOC_008458 CR626907.1 non-coding upstream 85868 21167142 ~ 21177049 (+)
XLOC_008457 NA non-coding upstream 98344 21164035 ~ 21164573 (+)
XLOC_008472 NA non-coding downstream 432100 21707783 ~ 21719970 (+)

Expression


Co-expression Network