G132974


Basic Information

Item Value
gene id G132974
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10022076 ~ 10022277 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU151203
CATACATTCAAATTTGAACTGCAATTTTGCATTCTGTTTCTTAGTTCAATTTGAATTGAATTCAAATTCAAGAACTGAACTGGGATTTAAAAGGCATTCTCAGTTCAATTCTGAATGATGCACAACCCTGGTTGGAAGAATTTGAGAGAGCATAATAAACAATTCTGAACCACAGTAATGGGCATTTTCTTCCATTAAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151203 True 202 lncRNA 0.34 1 10022076 10022277

Neighbor

gene id symbol gene type direction distance location
CI01000026_09915483_09917692 NA coding upstream 104157 9915445 ~ 9917919 (+)
CI01000026_09900193_09906874 SALL1A, SALL1 coding upstream 114839 9900193 ~ 9907237 (+)
CI01000026_09666763_09669325 NA coding upstream 352374 9666680 ~ 9669702 (+)
CI01000026_09602263_09635635 TOX3 coding upstream 385082 9601643 ~ 9636994 (+)
CI01000026_09365911_09428712 CHD9 coding upstream 593000 9364907 ~ 9429076 (+)
CI01000026_10124232_10124468 NA coding downstream 101639 10123916 ~ 10125835 (+)
CI01000026_10136110_10149386 BRD7 coding downstream 113719 10135996 ~ 10149466 (+)
CI01000026_10200749_10202405 NA coding downstream 176316 10198593 ~ 10202514 (+)
CI01000026_10265012_10268157 NA coding downstream 242668 10264945 ~ 10268548 (+)
CI01000026_10315650_10317985 NA coding downstream 292802 10315079 ~ 10317990 (+)
G132949 NA non-coding upstream 33413 9988139 ~ 9988663 (+)
G132950 NA non-coding upstream 38156 9983027 ~ 9983920 (+)
G132951 NA non-coding upstream 42977 9978473 ~ 9979099 (+)
G132953 NA non-coding upstream 91363 9930485 ~ 9930713 (+)
G132800 NA non-coding upstream 101988 9919386 ~ 9920088 (+)
G132977 NA non-coding downstream 7962 10030239 ~ 10030511 (+)
G133153 NA non-coding downstream 46299 10068576 ~ 10068873 (+)
G133188 NA non-coding downstream 79742 10102019 ~ 10152201 (+)
G133281 NA non-coding downstream 247790 10270067 ~ 10270293 (+)
G133285 NA non-coding downstream 255288 10277565 ~ 10277783 (+)
G132667 NA other upstream 452916 9568739 ~ 9569160 (+)
G131077 NA other upstream 1515289 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 1722662 8297857 ~ 8307629 (+)
G130967 NA other upstream 1833003 8188374 ~ 8189073 (+)
G130552 NA other upstream 2925424 7095053 ~ 7096652 (+)
G133192 NA other downstream 137542 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 1048491 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 1222656 11241496 ~ 11246204 (+)
G133542 NA other downstream 1453840 11476117 ~ 11477544 (+)

Expression


Co-expression Network